Version 5.4
Mus musculus Gene: Ccdc47
Summary
InnateDB Gene IDBG-267873.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Ccdc47
Gene Name coiled-coil domain containing 47
Synonyms 2610204L23Rik; asp4; C88307; calumin
Species Mus musculus
Ensembl Gene ENSMUSG00000078622
Encoded Proteins
IDBP-213391
coiled-coil domain containing 47
IDBP-267875
coiled-coil domain containing 47
IDBP-540899
coiled-coil domain containing 47
IDBP-534224
coiled-coil domain containing 47
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000108588:
Gene Information
Type Protein coding
Genomic Location Chromosome 11:106197408-106216344
Strand Reverse strand
Band E1
Transcripts
ENSMUST00000002043 ENSMUSP00000002043
ENSMUST00000106865 ENSMUSP00000102478
ENSMUST00000125383 ENSMUSP00000122736
ENSMUST00000137915 ENSMUSP00000117127
ENSMUST00000153982
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 4 experimentally validated interaction(s) in this database.
They are also associated with 24 interaction(s) predicted by orthology.
Experimentally validated
Total 4 [view]
Protein-Protein 4 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 24 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0005509 calcium ion binding
GO:0005515 protein binding
GO:0044822 poly(A) RNA binding
Biological Process
GO:0001649 osteoblast differentiation
GO:0006983 ER overload response
GO:0009791 post-embryonic development
GO:0055074 calcium ion homeostasis
Cellular Component
GO:0005783 endoplasmic reticulum
GO:0016020 membrane
GO:0016021 integral component of membrane
Orthologs
Species
Homo sapiens
Bos taurus
Gene ID
Gene Order
ENSG00000108588
View Gene Order
ENSBTAG00000011834
Not yet available
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene Mm.22109 Mm.399500 Mm.409959
RefSeq NM_026009
OMIM
CCDS CCDS25551
HPRD
IMGT
MGI ID
MGI Symbol
EMBL
GenPept
RNA Seq Atlas

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca