Version 5.4
Homo sapiens Gene: PAPOLB
Summary
InnateDB Gene IDBG-281496.4
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol PAPOLB
Gene Name poly(A) polymerase beta (testis specific)
Synonyms
Species Homo sapiens
Ensembl Gene ENSG00000218823
Encoded Proteins
IDBP-292580
poly(A) polymerase beta (testis specific)
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary Currently no Entrez Summary Available. You might want to check the Summary Sections of the Orthologs.
Gene Information
Type Protein coding
Genomic Location Chromosome 7:4857733-4861994
Strand Reverse strand
Band p22.1
Transcripts
ENST00000404991 ENSP00000384700
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 1 experimentally validated interaction(s) in this database.
Experimentally validated
Total 1 [view]
Protein-Protein 1 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Gene Ontology

Molecular Function
Accession GO Term
GO:0003723 RNA binding
GO:0004652 polynucleotide adenylyltransferase activity
GO:0005515 protein binding
GO:0005524 ATP binding
GO:0016779 nucleotidyltransferase activity
GO:0046872 metal ion binding
Biological Process
GO:0000398 mRNA splicing, via spliceosome
GO:0006369 termination of RNA polymerase II transcription
GO:0006378 mRNA polyadenylation
GO:0031123 RNA 3'-end processing
GO:0043631 RNA polyadenylation
Cellular Component
GO:0005634 nucleus
GO:0005737 cytoplasm
GO:0005783 endoplasmic reticulum
Orthologs
No orthologs found for this gene
Pathways
NETPATH
REACTOME
KEGG
hsa03015
mRNA surveillance pathway pathway
INOH
PID NCI
Cross-References
SwissProt Q9NRJ5
TrEMBL A4D1Z6
UniProt Splice Variant
Entrez Gene 56903
UniGene Hs.487409
RefSeq NM_020144
HUGO HGNC:15970
OMIM 607436
CCDS
HPRD 08467
IMGT
EMBL AC092610 AF218840 BC036653 CH236953
GenPept AAF81013 AAH36653 AAS07561 EAL23967
RNA Seq Atlas 56903

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca