Version 5.4
Homo sapiens Gene: GTDC2
Summary
InnateDB Gene IDBG-28325.7
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol GTDC2
Gene Name glycosyltransferase-like domain containing 2
Synonyms
Species Homo sapiens
Ensembl Gene ENSG00000144647
Encoded Proteins
IDBP-28327
chromosome 3 open reading frame 39
IDBP-373767
chromosome 3 open reading frame 39
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene encodes a protein with glycosyltransferase activity although its function is not currently known. [provided by RefSeq, Sep 2012]
Gene Information
Type Protein coding
Genomic Location Chromosome 3:43079232-43106076
Strand Reverse strand
Band p22.1
Transcripts
ENST00000344697 ENSP00000344125
ENST00000441964 ENSP00000408992
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 2 experimentally validated interaction(s) in this database.
Experimentally validated
Total 2 [view]
Protein-Protein 2 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Gene Ontology

Molecular Function
Accession GO Term
GO:0005515 protein binding
GO:0008375 acetylglucosaminyltransferase activity
GO:0016757 transferase activity, transferring glycosyl groups
GO:0097363 protein O-GlcNAc transferase activity
Biological Process
GO:0006493 protein O-linked glycosylation
Cellular Component
GO:0005783 endoplasmic reticulum
GO:0005789 endoplasmic reticulum membrane
GO:0016021 integral component of membrane
Orthologs
Species
Mus musculus
Bos taurus
Gene ID
Gene Order
ENSMUSG00000066235
View Gene Order
ENSBTAG00000000459
Not yet available
Cross-References
SwissProt Q8NAT1
TrEMBL A0A024R2P4
UniProt Splice Variant
Entrez Gene 84892
UniGene Hs.606173 Hs.743396
RefSeq XM_005265515 XM_006713361 NM_032806
HUGO HGNC:25902
OMIM 614828
CCDS CCDS2709
HPRD 07863
IMGT
EMBL AC092042 AK027472 AK092147 AK124737 BC060861 CH471055
GenPept AAH60861 BAB55137 BAC03816 BAG54085 EAW64690 EAW64691 EAW64692
RNA Seq Atlas 84892

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca