Homo sapiens Gene: RBMY1J
Summary
InnateDB Gene IDBG-298410.4
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol RBMY1J
Gene Name RNA binding motif protein, Y-linked, family 1, member J
Synonyms
Species Homo sapiens
Ensembl Gene ENSG00000226941
Encoded Proteins
RNA binding motif protein, Y-linked, family 1, member J
RNA binding motif protein, Y-linked, family 1, member J
RNA binding motif protein, Y-linked, family 1, member J
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene encodes a protein containing an RNA-binding motif in the N-terminus and four SRGY (serine, arginine, glycine, tyrosine) boxes in the C-terminus. Multiple copies of this gene are found in the AZFb azoospermia factor region of chromosome Y and the encoded protein is thought to be involved in spermatogenesis. Most copies of this locus are pseudogenes, although six highly similar copies have full-length ORFs and are considered functional. Four functional copies of this gene are found within inverted repeat IR2; two functional copies of this gene are found in palindrome P3, along with two copies of PTPN13-like, Y-linked. [provided by RefSeq, Jul 2008]
Gene Information
Type Protein coding
Genomic Location Chromosome Y:22308823-22417881
Strand Forward strand
Band q11.223
Transcripts
ENST00000250831 ENSP00000250831
ENST00000445779 ENSP00000389621
ENST00000414629 ENSP00000405745
ENST00000470460
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 2 experimentally validated interaction(s) in this database.
Experimentally validated
Total 2 [view]
Protein-Protein 1 [view]
Protein-DNA 1 [view]
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Gene Ontology

Molecular Function
Accession GO Term
GO:0000166 nucleotide binding
GO:0003676 nucleic acid binding
GO:0003723 RNA binding
Biological Process
GO:0006397 mRNA processing
GO:0007283 spermatogenesis
GO:0008380 RNA splicing
Cellular Component
GO:0005575 cellular_component
GO:0005634 nucleus
Orthologs
No orthologs found for this gene
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene Hs.567746 Hs.632846
RefSeq NM_001006117 NM_152585 XM_005262576 XM_005262577 XM_005262589 XM_005262590
HUGO
OMIM
CCDS CCDS35484
HPRD 15233
IMGT
EMBL
GenPept
RNA Seq Atlas