Version 5.4
Homo sapiens Gene: LARP1B
Summary
InnateDB Gene IDBG-37722.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol LARP1B
Gene Name La ribonucleoprotein domain family, member 1B
Synonyms
Species Homo sapiens
Ensembl Gene ENSG00000138709
Encoded Proteins
IDBP-37724
La ribonucleoprotein domain family, member 1B
IDBP-241877
La ribonucleoprotein domain family, member 1B
IDBP-377653
La ribonucleoprotein domain family, member 1B
IDBP-474242
La ribonucleoprotein domain family, member 1B
IDBP-474004
La ribonucleoprotein domain family, member 1B
IDBP-475798
La ribonucleoprotein domain family, member 1B
IDBP-475040
La ribonucleoprotein domain family, member 1B
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene encodes a protein containing domains found in the La related protein of Drosophila melanogaster. La motif-containing proteins are thought to be RNA-binding proteins, where the La motif and adjacent amino acids fold into an RNA recognition motif. The La motif is also found in proteins unrelated to the La protein. Alternative splicing has been observed at this locus and three variants, encoding distinct isoforms, are described. Additional splice variation has been identified but the full-length nature of these transcripts has not been determined. [provided by RefSeq, Jul 2008]
Gene Information
Type Protein coding
Genomic Location Chromosome 4:128061268-128222931
Strand Forward strand
Band q28.2
Transcripts
ENST00000326639 ENSP00000321997
ENST00000394288 ENSP00000377829
ENST00000432347 ENSP00000390395
ENST00000512292 ENSP00000422850
ENST00000508819 ENSP00000427281
ENST00000507377 ENSP00000424383
ENST00000507259 ENSP00000423686
ENST00000508648
ENST00000506199
ENST00000503725
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 7 experimentally validated interaction(s) in this database.
Experimentally validated
Total 7 [view]
Protein-Protein 7 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Gene Ontology

Molecular Function
Accession GO Term
GO:0044822 poly(A) RNA binding
Biological Process
Cellular Component
GO:0005634 nucleus
GO:0019013 viral nucleocapsid
GO:0030529 ribonucleoprotein complex
Orthologs
No orthologs found for this gene
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene Hs.480712 Hs.654971 Hs.657067 Hs.734980
RefSeq NM_001278604 NM_018078 NM_032239 NM_178043 XM_005263097 XM_005263101
HUGO
OMIM
CCDS CCDS3738 CCDS47133 CCDS64057
HPRD 10963
IMGT
EMBL
GenPept
RNA Seq Atlas

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca