Version 5.4
Homo sapiens Gene: IFT172
Summary
InnateDB Gene IDBG-39604.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol IFT172
Gene Name intraflagellar transport 172 homolog (Chlamydomonas)
Synonyms
Species Homo sapiens
Ensembl Gene ENSG00000138002
Encoded Proteins
IDBP-39608
intraflagellar transport 172 homolog (Chlamydomonas)
IDBP-88151
intraflagellar transport 172 homolog (Chlamydomonas)
IDBP-369879
intraflagellar transport 172 homolog (Chlamydomonas)
IDBP-369884
intraflagellar transport 172 homolog (Chlamydomonas)
IDBP-369886
intraflagellar transport 172 homolog (Chlamydomonas)
IDBP-369893
intraflagellar transport 172 homolog (Chlamydomonas)
IDBP-473913
intraflagellar transport 172 homolog (Chlamydomonas)
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary Currently no Entrez Summary Available. You might want to check the Summary Sections of the Orthologs.
Gene Information
Type Protein coding
Genomic Location Chromosome 2:27444371-27489789
Strand Reverse strand
Band p23.3
Transcripts
ENST00000260570 ENSP00000260570
ENST00000359466 ENSP00000352443
ENST00000420854 ENSP00000398633
ENST00000450564 ENSP00000399017
ENST00000443889 ENSP00000404082
ENST00000416524 ENSP00000407408
ENST00000509128 ENSP00000427255
ENST00000507184
ENST00000494163
ENST00000479419
ENST00000480892
ENST00000475909
ENST00000476693
ENST00000489492
ENST00000463613
ENST00000511842
ENST00000476264
ENST00000475476
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 5 experimentally validated interaction(s) in this database.
They are also associated with 1 interaction(s) predicted by orthology.
Experimentally validated
Total 5 [view]
Protein-Protein 4 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 1 [view]
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 1 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0005488 binding
GO:0005515 protein binding
Biological Process
GO:0001841 neural tube formation
GO:0001843 neural tube closure
GO:0001947 heart looping
GO:0007219 Notch signaling pathway
GO:0007224 smoothened signaling pathway
GO:0007368 determination of left/right symmetry
GO:0007420 brain development
GO:0007507 heart development
GO:0008544 epidermis development
GO:0008589 regulation of smoothened signaling pathway
GO:0009953 dorsal/ventral pattern formation
GO:0016485 protein processing
GO:0021522 spinal cord motor neuron differentiation
GO:0021915 neural tube development
GO:0031122 cytoplasmic microtubule organization
GO:0042384 cilium assembly
GO:0045880 positive regulation of smoothened signaling pathway
GO:0050680 negative regulation of epithelial cell proliferation
GO:0060021 palate development
GO:0060173 limb development
GO:0060271 cilium morphogenesis
GO:0060348 bone development
GO:0061525 hindgut development
GO:0070986 left/right axis specification
Cellular Component
GO:0005929 cilium
GO:0030992 intraciliary transport particle B
GO:0097225 sperm midpiece
GO:0097228 sperm principal piece
Orthologs
Species
Mus musculus
Bos taurus
Gene ID
Gene Order
ENSMUSG00000038564
View Gene Order
ENSBTAG00000018157
Not yet available
Pathways
NETPATH
REACTOME
REACT_228134
Signaling by Hedgehog pathway
REACT_111102
Signal Transduction pathway
REACT_267634
Hedgehog 'off' state pathway
KEGG
INOH
PID NCI
hedgehog_glipathway
Hedgehog signaling events mediated by Gli proteins
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene Hs.127401
RefSeq NM_015662 XM_006711986 XM_006711987
HUGO
OMIM
CCDS CCDS1755
HPRD 09576
IMGT
EMBL
GenPept
RNA Seq Atlas

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca