Version 5.4
Homo sapiens Gene: IQCJ-SCHIP1
Summary
InnateDB Gene IDBG-408706.4
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol IQCJ-SCHIP1
Gene Name IQCJ-SCHIP1 readthrough
Synonyms
Species Homo sapiens
Ensembl Gene ENSG00000250588
Encoded Proteins
IDBP-63353
IQCJ-SCHIP1 readthrough
IDBP-385107
IQCJ-SCHIP1 readthrough
IDBP-482545
IQCJ-SCHIP1 readthrough
IDBP-476135
IQCJ-SCHIP1 readthrough
IDBP-483977
IQCJ-SCHIP1 readthrough
IDBP-478108
IQCJ-SCHIP1 readthrough
IDBP-474876
IQCJ-SCHIP1 readthrough
IDBP-479326
IQCJ-SCHIP1 readthrough
IDBP-482397
IQCJ-SCHIP1 readthrough
IDBP-483289
IQCJ-SCHIP1 readthrough
IDBP-476275
IQCJ-SCHIP1 readthrough
IDBP-478923
IQCJ-SCHIP1 readthrough
IDBP-590964
IQCJ-SCHIP1 readthrough
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This locus represents naturally occurring read-through transcription from the neighboring IQ motif containing J (IQCJ) and schwannomin interacting protein 1 (SCHIP1) genes. Alternative splicing results in multiple transcript variants that are composed of in-frame exons from each individual gene. The resulting fusion products are thought to be components of the multimolecular complexes of axon initial segments and nodes of Ranvier, and they may play a role in calcium-mediated responses. [provided by RefSeq, Oct 2010]
Gene Information
Type Protein coding
Genomic Location Chromosome 3:158962235-159897366
Strand Forward strand
Band q25.32
Transcripts
ENST00000337808 ENSP00000337239
ENST00000412423 ENSP00000400942
ENST00000467442
ENST00000471575 ENSP00000419668
ENST00000485419 ENSP00000420182
ENST00000476809 ENSP00000418692
ENST00000483486 ENSP00000419349
ENST00000481715 ENSP00000419125
ENST00000488898 ENSP00000420478
ENST00000467377 ENSP00000418452
ENST00000460298 ENSP00000417305
ENST00000472451 ENSP00000417080
ENST00000473061 ENSP00000418570
ENST00000527095 ENSP00000436076
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 8 experimentally validated interaction(s) in this database.
They are also associated with 1 interaction(s) predicted by orthology.
Experimentally validated
Total 8 [view]
Protein-Protein 8 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 1 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0005515 protein binding
GO:0042802 identical protein binding
Biological Process
GO:0008150 biological_process
Cellular Component
GO:0005737 cytoplasm
Orthologs
Species
Mus musculus
Gene ID
Gene Order
ENSMUSG00000027777
View Gene Order
Cross-References
SwissProt
TrEMBL C9J366 C9J615 C9J630 C9JMW4 C9JVF1 C9JXR1 C9K0A8
UniProt Splice Variant
Entrez Gene 29970
UniGene Hs.134665 Hs.595561
RefSeq NM_001197107 NM_001197108 NM_001197113 NM_001197114 NM_014575
HUGO HGNC:38842
OMIM
CCDS CCDS3186 CCDS56289 CCDS56291 CCDS56292 CCDS56293
HPRD
IMGT
EMBL AC021654 AC063955 AC068770 AC092861 AC092943 AC092997 AC092999 AC107312 AC131150 AF070614 AF145713 AF145714 AF145715 AK091871 BC005947 BC036535 CH471052 DQ157847 DQ157848
GenPept AAC25386 AAF34241 AAF34242 AAF34243 AAH05947 AAH36535 ABA42889 ABA42890 BAG52432 EAW78662
RNA Seq Atlas 100505385 29970

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca