Homo sapiens Gene: ZNF398
Summary
InnateDB Gene IDBG-47250.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol ZNF398
Gene Name zinc finger protein 398
Synonyms
Species Homo sapiens
Ensembl Gene ENSG00000197024
Encoded Proteins
zinc finger protein 398
zinc finger protein 398
zinc finger protein 398
zinc finger protein 398
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene encodes a member of the Kruppel family of C2H2-type zinc-finger transcription factor proteins. The encoded protein acts as a transcriptional activator. Two transcript variants encoding distinct isoforms have been identified for this gene. Other transcript variants have been described, but their full length sequence has not been determined. [provided by RefSeq, Jul 2008]
Gene Information
Type Protein coding
Genomic Location Chromosome 7:149126416-149182802
Strand Forward strand
Band q36.1
Transcripts
ENST00000426851 ENSP00000389972
ENST00000485111
ENST00000475153 ENSP00000420418
ENST00000483892 ENSP00000418564
ENST00000491174 ENSP00000419391
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 4 experimentally validated interaction(s) in this database.
They are also associated with 1 interaction(s) predicted by orthology.
Experimentally validated
Total 4 [view]
Protein-Protein 4 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 1 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0003676 nucleic acid binding
GO:0003677 DNA binding
GO:0046872 metal ion binding
Biological Process
GO:0006351 transcription, DNA-templated
GO:0006355 regulation of transcription, DNA-templated
GO:0045893 positive regulation of transcription, DNA-templated
Cellular Component
GO:0005622 intracellular
GO:0005634 nucleus
Orthologs
Species
Mus musculus
Bos taurus
Gene ID
Gene Order
Method
Confidence
Comments
Non-SSD Ortholog
Possible paralog/unusual divergence/ gene prediction error
Not yet available
Non-SSD Ortholog
Possible paralog/unusual divergence/ gene prediction error
Pathways
NETPATH
REACTOME
Generic Transcription Pathway pathway
Gene Expression pathway
KEGG
INOH
PID BIOCARTA
PID NCI
Cross-References
SwissProt Q8TD17
TrEMBL
UniProt Splice Variant
Entrez Gene 57541
UniGene Hs.632032
RefSeq NM_020781 NM_170686
HUGO HGNC:18373
OMIM
CCDS CCDS47739 CCDS5894
HPRD
IMGT
EMBL AB037760 AC004890 AK290499 AK304603 AY049743 AY049744 BC043295 CH471146
GenPept AAH43295 AAK92788 AAK92789 BAA92577 BAF83188 BAG65389 EAW80057
RNA Seq Atlas 57541