Version 5.4
Homo sapiens Gene: SLC4A9
Summary
InnateDB Gene IDBG-48513.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol SLC4A9
Gene Name solute carrier family 4, sodium bicarbonate cotransporter, member 9
Synonyms
Species Homo sapiens
Ensembl Gene ENSG00000113073
Encoded Proteins
IDBP-378134
solute carrier family 4, sodium bicarbonate cotransporter, member 9
IDBP-476184
solute carrier family 4, sodium bicarbonate cotransporter, member 9
IDBP-483615
solute carrier family 4, sodium bicarbonate cotransporter, member 9
IDBP-485452
solute carrier family 4, sodium bicarbonate cotransporter, member 9
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary The protein encoded by this gene is a membrane protein involved in anion exchange. Expression of this gene is mostly limited to the kidney. Several transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, May 2012]
Gene Information
Type Protein coding
Genomic Location Chromosome 5:140360202-140375143
Strand Forward strand
Band q31.3
Transcripts
ENST00000432095 ENSP00000410056
ENST00000506757 ENSP00000424424
ENST00000506545 ENSP00000422855
ENST00000507527 ENSP00000427661
ENST00000514849
ENST00000504742
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 0 experimentally validated interaction(s) in this database.
Gene Ontology

Molecular Function
Accession GO Term
GO:0005215 transporter activity
GO:0005452 inorganic anion exchanger activity
GO:0008509 anion transmembrane transporter activity
Biological Process
GO:0006810 transport
GO:0006811 ion transport
GO:0006820 anion transport
GO:0015701 bicarbonate transport
GO:0055085 transmembrane transport
Cellular Component
GO:0005886 plasma membrane
GO:0016020 membrane
GO:0016021 integral component of membrane
GO:0045177 apical part of cell
Orthologs
Species
Mus musculus
Bos taurus
Gene ID
Gene Order
ENSMUSG00000024485
View Gene Order
ENSBTAG00000021775
Not yet available
Pathways
NETPATH
REACTOME
REACT_19298
Bicarbonate transporters pathway
REACT_19397
Transport of inorganic cations/anions and amino acids/oligopeptides pathway
REACT_15518
Transmembrane transport of small molecules pathway
REACT_19118
SLC-mediated transmembrane transport pathway
KEGG
INOH
PID NCI
Cross-References
SwissProt Q96Q91
TrEMBL
UniProt Splice Variant
Entrez Gene 83697
UniGene Hs.550313
RefSeq NM_001258426 NM_001258427 NM_001258428 NM_031467 XM_005268521
HUGO HGNC:11035
OMIM 610207
CCDS CCDS47278 CCDS58973 CCDS58974 CCDS58975
HPRD
IMGT
EMBL AB032762 AC008438 AF313465 AF332961 AF336237 BC136262 BC143602 CH471062
GenPept AAI36263 AAI43603 AAK16733 AAK28832 AAK69625 BAA93010 EAW62062 EAW62063 EAW62064 EAW62066 EAW62067 EAW62068
RNA Seq Atlas 83697

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca