Version 5.4
Homo sapiens Gene: LEPREL4
Summary
InnateDB Gene IDBG-49827.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol LEPREL4
Gene Name leprecan-like 4
Synonyms NO55; NOL55; SC65
Species Homo sapiens
Ensembl Gene ENSG00000141696
Encoded Proteins
IDBP-49829
leprecan-like 4
IDBP-242631
leprecan-like 4
IDBP-603477
leprecan-like 4
IDBP-763389
IDBP-761098
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This nucleolar protein was first characterized because it was an autoantigen in cases on interstitial cystitis. The protein, with a predicted molecular weight of 50 kDa, appears to be localized in the particulate compartment of the interphase nucleolus, with a distribution distinct from that of nucleolar protein B23. During mitosis it is associated with chromosomes. [provided by RefSeq, Jul 2008]
Gene Information
Type Protein coding
Genomic Location Chromosome 17:41801947-41812604
Strand Reverse strand
Band q21.2
Transcripts
ENST00000355468 ENSP00000347649
ENST00000393928 ENSP00000377505
ENST00000484247
ENST00000465097 ENSP00000435615
ENST00000467164
ENST00000592026 ENSP00000468174
ENST00000590496 ENSP00000464968
ENST00000587455
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 5 experimentally validated interaction(s) in this database.
Experimentally validated
Total 5 [view]
Protein-Protein 5 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Gene Ontology

Molecular Function
Accession GO Term
Biological Process
GO:0007130 synaptonemal complex assembly
Cellular Component
GO:0000794 condensed nuclear chromosome
GO:0000795 synaptonemal complex
GO:0005730 nucleolus
Orthologs
Species
Mus musculus
Bos taurus
Gene ID
Gene Order
ENSMUSG00000006931
View Gene Order
ENSBTAG00000025752
Not yet available
Cross-References
SwissProt
TrEMBL K7EJ03
UniProt Splice Variant
Entrez Gene 10609
UniGene Hs.446459
RefSeq NM_006455 XM_005256952
HUGO HGNC:16946
OMIM
CCDS CCDS11408
HPRD 10126
IMGT
EMBL AC091172 AC109319
GenPept
RNA Seq Atlas 102723404 10609

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca