Version 5.4
Homo sapiens Gene: C17orf49
Summary
InnateDB Gene IDBG-545660.3
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol C17orf49
Gene Name chromosome 17 open reading frame 49
Synonyms
Species Homo sapiens
Ensembl Gene ENSG00000258315
Encoded Proteins
IDBP-364643
chromatin complexes subunit BAP18 isoform 2
IDBP-592113
chromatin complexes subunit BAP18 isoform 2
IDBP-594267
chromatin complexes subunit BAP18 isoform 2
IDBP-596617
chromatin complexes subunit BAP18 isoform 2
IDBP-587475
chromatin complexes subunit BAP18 isoform 2
IDBP-764350
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary Currently no Entrez Summary Available. You might want to check the Summary Sections of the Orthologs.
Gene Information
Type Protein coding
Genomic Location Chromosome 17:7014495-7017525
Strand Forward strand
Band p13.1
Transcripts
ENST00000439424 ENSP00000411851
ENST00000546495 ENSP00000448598
ENST00000546760 ENSP00000447646
ENST00000549857
ENST00000552402 ENSP00000448746
ENST00000552775 ENSP00000447063
ENST00000550038
ENST00000547747 ENSP00000468587
ENST00000547709
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 5 experimentally validated interaction(s) in this database.
They are also associated with 1 interaction(s) predicted by orthology.
Experimentally validated
Total 5 [view]
Protein-Protein 4 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 1 [view]
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 1 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0003677 DNA binding
GO:0003682 chromatin binding
Biological Process
GO:0016568 chromatin modification
Cellular Component
GO:0016589 NURF complex
GO:0071339 MLL1 complex
Orthologs
Species
Mus musculus
Bos taurus
Gene ID
Gene Order
ENSMUSG00000020831
View Gene Order
ENSBTAG00000021931
Not yet available
Cross-References
SwissProt Q8IXM2
TrEMBL
UniProt Splice Variant
Entrez Gene 124944
UniGene
RefSeq NM_001142799 NM_001142798 NM_174893
HUGO HGNC:28737
OMIM
CCDS CCDS45596 CCDS32542 CCDS45595
HPRD 14662
IMGT
EMBL AC040977 AK295795 BC040036 BC040148 CH471108 CN280697
GenPept AAH40036 AAH40148 BAG58615 EAW90278
RNA Seq Atlas 124944

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca