Version 5.4
Homo sapiens Gene: EBF1
Summary
InnateDB Gene IDBG-55765.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol EBF1
Gene Name early B-cell factor 1
Synonyms COE1; EBF; O/E-1; OLF1
Species Homo sapiens
Ensembl Gene ENSG00000164330
Encoded Proteins
IDBP-13030
early B-cell factor 1
IDBP-55767
early B-cell factor 1
IDBP-481154
early B-cell factor 1
IDBP-809506
early B-cell factor 1
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary Currently no Entrez Summary Available. You might want to check the Summary Sections of the Orthologs.
Gene Information
Type Protein coding
Genomic Location Chromosome 5:158695916-159099761
Strand Reverse strand
Band q33.3
Transcripts
ENST00000380654 ENSP00000370029
ENST00000313708 ENSP00000322898
ENST00000519890
ENST00000519739
ENST00000518836
ENST00000518323
ENST00000517373 ENSP00000428020
ENST00000522192
ENST00000523464
ENST00000523315
ENST00000622875 ENSP00000477809
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 10 experimentally validated interaction(s) in this database.
They are also associated with 7 interaction(s) predicted by orthology.
Experimentally validated
Total 10 [view]
Protein-Protein 6 [view]
Protein-DNA 4 [view]
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 7 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0003677 DNA binding
GO:0003700 sequence-specific DNA binding transcription factor activity
GO:0005515 protein binding
GO:0046872 metal ion binding
GO:0046983 protein dimerization activity
GO:0070742 C2H2 zinc finger domain binding
Biological Process
GO:0006351 transcription, DNA-templated
GO:0006355 regulation of transcription, DNA-templated
GO:0007275 multicellular organismal development
GO:0045893 positive regulation of transcription, DNA-templated
Cellular Component
GO:0005634 nucleus
Orthologs
Species
Mus musculus
Bos taurus
Gene ID
Gene Order
ENSMUSG00000057098
View Gene Order
ENSBTAG00000037508
Not yet available
Pathways
NETPATH
REACTOME
REACT_27161
Transcriptional regulation of white adipocyte differentiation pathway
REACT_111045
Developmental Biology pathway
KEGG
INOH
PID NCI
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene Hs.573143 Hs.627335 Hs.640721
RefSeq NM_001290360 NM_024007 NM_182708 XM_005265833 XM_005265834 XM_006714827
HUGO
OMIM
CCDS CCDS4343
HPRD 01256
IMGT
EMBL
GenPept
RNA Seq Atlas

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca