Homo sapiens Gene: COL6A6
Summary
InnateDB Gene IDBG-56312.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol COL6A6
Gene Name collagen, type VI, alpha 6
Synonyms
Species Homo sapiens
Ensembl Gene ENSG00000206384
Encoded Proteins
collagen, type VI, alpha 6
collagen, type VI, alpha 6
collagen, type VI, alpha 6
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary Currently no Entrez Summary Available. You might want to check the Summary Sections of the Orthologs.
Gene Information
Type Protein coding
Genomic Location Chromosome 3:130560334-130678155
Strand Forward strand
Band q22.1
Transcripts
ENST00000358511 ENSP00000351310
ENST00000506143 ENSP00000426006
ENST00000511332 ENSP00000422921
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 0 experimentally validated interaction(s) in this database.
Gene Ontology

Molecular Function
Accession GO Term
Biological Process
GO:0007155 cell adhesion
GO:0022617 extracellular matrix disassembly
GO:0030198 extracellular matrix organization
GO:0030574 collagen catabolic process
Cellular Component
GO:0005576 extracellular region
GO:0005578 proteinaceous extracellular matrix
GO:0005581 collagen trimer
GO:0031012 extracellular matrix
Orthologs
Species
Mus musculus
Bos taurus
Gene ID
Gene Order
Method
Confidence
Comments
SSD Ortholog
Ortholog supports species divergence
Not yet available
SSD Ortholog
Ortholog supports species divergence
Pathways
NETPATH
REACTOME
Developmental Biology pathway
Collagen biosynthesis and modifying enzymes pathway
Extracellular matrix organization pathway
NCAM signaling for neurite out-growth pathway
Degradation of the extracellular matrix pathway
NCAM1 interactions pathway
Axon guidance pathway
Signal Transduction pathway
Integrin cell surface interactions pathway
ECM proteoglycans pathway
Assembly of collagen fibrils and other multimeric structures pathway
Collagen degradation pathway
Signaling by PDGF pathway
Collagen formation pathway
KEGG
Focal adhesion pathway
ECM-receptor interaction pathway
Protein digestion and absorption pathway
INOH
PID BIOCARTA
PID NCI
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene 131873
UniGene Hs.477571 Hs.591282 Hs.596709 Hs.596805
RefSeq NM_001102608 XM_005247121
HUGO HGNC:27023
OMIM
CCDS CCDS46911
HPRD
IMGT
EMBL
GenPept
RNA Seq Atlas 131873