Version 5.4
Homo sapiens Gene: NOP16
Summary
InnateDB Gene IDBG-58792.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol NOP16
Gene Name NOP16 nucleolar protein homolog (yeast)
Synonyms
Species Homo sapiens
Ensembl Gene ENSG00000048162
Encoded Proteins
IDBP-483755
NOP16 nucleolar protein homolog (yeast)
IDBP-483517
NOP16 nucleolar protein homolog (yeast)
IDBP-811776
NOP16 nucleolar protein
IDBP-811779
NOP16 nucleolar protein
IDBP-811780
NOP16 nucleolar protein
IDBP-811786
NOP16 nucleolar protein
IDBP-811793
NOP16 nucleolar protein
IDBP-811795
NOP16 nucleolar protein
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary NOP16 is transcriptionally regulated by c-Myc (MYC; MIM 190080), upregulated in breast cancer, and overexpression is associated with poor patient survival (Butt et al., 2008).[supplied by OMIM, Jun 2009]
Gene Information
Type Protein coding
Genomic Location Chromosome 5:176383938-176388975
Strand Reverse strand
Band q35.2
Transcripts
ENST00000502663 ENSP00000423835
ENST00000503849
ENST00000504821
ENST00000509257 ENSP00000427489
ENST00000502577
ENST00000510608
ENST00000621444 ENSP00000479445
ENST00000614830 ENSP00000480832
ENST00000616685 ENSP00000478283
ENST00000618911 ENSP00000483001
ENST00000613081 ENSP00000484440
ENST00000619979 ENSP00000484969
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 19 experimentally validated interaction(s) in this database.
Experimentally validated
Total 19 [view]
Protein-Protein 17 [view]
Protein-DNA 2 [view]
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Gene Ontology

Molecular Function
Accession GO Term
GO:0044822 poly(A) RNA binding
Biological Process
Cellular Component
GO:0005634 nucleus
GO:0005730 nucleolus
GO:0043231 intracellular membrane-bounded organelle
Orthologs
Species
Mus musculus
Bos taurus
Gene ID
Gene Order
ENSMUSG00000025869
View Gene Order
ENSBTAG00000010734
Not yet available
Cross-References
SwissProt
TrEMBL Q6PIM0
UniProt Splice Variant
Entrez Gene 51491
UniGene
RefSeq NM_001256539 NM_001256540 NM_001291305 NM_016391
HUGO HGNC:26934
OMIM 612861
CCDS CCDS43403
HPRD
IMGT
EMBL BC032424 CH471195
GenPept AAH32424 EAW85084
RNA Seq Atlas 51491

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca