Version 5.4
Homo sapiens Gene: PTCD3
Summary
InnateDB Gene IDBG-59626.7
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol PTCD3
Gene Name pentatricopeptide repeat domain 3
Synonyms
Species Homo sapiens
Ensembl Gene ENSG00000132300
Encoded Proteins
IDBP-59628
Pentatricopeptide repeat domain 3
IDBP-295349
Pentatricopeptide repeat domain 3
IDBP-295347
Pentatricopeptide repeat domain 3
IDBP-381886
Pentatricopeptide repeat domain 3
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary Currently no Entrez Summary Available. You might want to check the Summary Sections of the Orthologs.
Gene Information
Type Protein coding
Genomic Location Chromosome 2:86106182-86142157
Strand Forward strand
Band p11.2
Transcripts
ENST00000254630 ENSP00000254630
ENST00000409783 ENSP00000386922
ENST00000409326 ENSP00000386963
ENST00000418628 ENSP00000394441
ENST00000465560
ENST00000488801
ENST00000473829
ENST00000483925
ENST00000484203
ENST00000480102
ENST00000464541
ENST00000476215
ENST00000487043
ENST00000469585
ENST00000493430
ENST00000467273
ENST00000494323
ENST00000472044
ENST00000477520
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 37 experimentally validated interaction(s) in this database.
Experimentally validated
Total 37 [view]
Protein-Protein 37 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Gene Ontology

Molecular Function
Accession GO Term
GO:0019843 rRNA binding
GO:0043024 ribosomal small subunit binding
GO:0044822 poly(A) RNA binding
Biological Process
GO:0006417 regulation of translation
GO:0032543 mitochondrial translation
Cellular Component
GO:0005739 mitochondrion
Orthologs
Species
Mus musculus
Bos taurus
Gene ID
Gene Order
ENSMUSG00000063884
View Gene Order
ENSBTAG00000006482
Not yet available
Pathways
NETPATH
REACTOME
REACT_200751
Organelle biogenesis and maintenance pathway
REACT_267673
Mitochondrial translation pathway
REACT_267680
Mitochondrial translation initiation pathway
REACT_267602
Mitochondrial translation termination pathway
REACT_267677
Mitochondrial translation elongation pathway
KEGG
INOH
PID NCI
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene Hs.323489 Hs.623885
RefSeq NM_017952
HUGO
OMIM
CCDS CCDS33235
HPRD 08631
IMGT
EMBL
GenPept
RNA Seq Atlas

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca