Version 5.4
Mus musculus Gene: Gpank1
Summary
InnateDB Gene IDBG-606695.3
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Gpank1
Gene Name G patch domain and ankyrin repeats 1
Synonyms Bat-4; Bat4; D17H6S54E; G5
Species Mus musculus
Ensembl Gene ENSMUSG00000092417
Encoded Proteins
IDBP-176736
G patch domain and ankyrin repeats 1
IDBP-628052
G patch domain and ankyrin repeats-containing protein 1 isoform 2
IDBP-714806
IDBP-628053
G patch domain and ankyrin repeats-containing protein 1 isoform 2
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000204438:
This gene is located in a cluster of HLA-B-associated transcripts, which is included in the human major histocompatability complex III region. This gene encodes a protein which is thought to play a role in immunity. Multiple alternatively spliced variants, encoding the same protein, have been identified. [provided by RefSeq, Nov 2010]
Gene Information
Type Protein coding
Genomic Location Chromosome 17:35121455-35124814
Strand Forward strand
Band B1
Transcripts
ENSMUST00000052167 ENSMUSP00000056646
ENSMUST00000173380 ENSMUSP00000134694
ENSMUST00000173043 ENSMUSP00000135684
ENSMUST00000165306 ENSMUSP00000133240
ENSMUST00000177018
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 1 experimentally validated interaction(s) in this database.
They are also associated with 6 interaction(s) predicted by orthology.
Experimentally validated
Total 1 [view]
Protein-Protein 1 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 6 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0003676 nucleic acid binding
GO:0005515 protein binding
Biological Process
GO:0008150 biological_process
Cellular Component
GO:0005575 cellular_component
Orthologs
Species
Homo sapiens
Bos taurus
Gene ID
Gene Order
ENSG00000204438
View Gene Order
ENSBTAG00000008835
Not yet available
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene Mm.7405
RefSeq NM_001128597 NM_032460 XM_006525181 XM_006525182 XM_006525183 XM_006525184 XM_006525447 XM_006525448 XM_006536716 XM_006536717 XM_006537447 XM_006537448
OMIM
CCDS CCDS28685 CCDS50084
HPRD
IMGT
MGI ID
MGI Symbol
EMBL
GenPept
RNA Seq Atlas

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca