Version 5.4
Bos taurus Gene: STX1B
Summary
InnateDB Gene IDBG-639520.3
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol STX1B
Gene Name Syntaxin-1B
Synonyms STX1B2
Species Bos taurus
Ensembl Gene ENSBTAG00000002349
Encoded Proteins
IDBP-691685
Syntaxin-1B
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000099365:
Syntaxins are cellular receptors for transport vesicles (see MIM 603765). One of these proteins, designated syntaxin 1B (STX1B), is directly implicated in the process of calcium-dependent synaptic transmission in rat brain (Smirnova et al., 1993 [PubMed 8105537]). The expression of this protein is transiently induced by long-term potentiation of synaptic responses in the rat hippocampus. The protein may play an important role in the excitatory pathway of synaptic transmission, which is known to be implicated in several neurologic diseases.[supplied by OMIM, Nov 2010]
Gene Information
Type Protein coding
Genomic Location Chromosome 25:27382282-27398020
Strand Reverse strand
Band
Transcripts
ENSBTAT00000022704 ENSBTAP00000022704
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 0 experimentally validated interaction(s) in this database.
They are also associated with 6 interaction(s) predicted by orthology.
Predicted by orthology
Total 6 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0000149 SNARE binding
GO:0005484 SNAP receptor activity
GO:0005515 protein binding
Biological Process
GO:0006810 transport
GO:0006836 neurotransmitter transport
GO:0006886 intracellular protein transport
GO:0016192 vesicle-mediated transport
GO:0017157 regulation of exocytosis
Cellular Component
GO:0016020 membrane
GO:0016021 integral component of membrane
Orthologs
Species
Homo sapiens
Mus musculus
Gene ID
Gene Order
ENSG00000099365
View Gene Order
ENSMUSG00000030806
View Gene Order
Pathway Predictions based on Human Orthology Data
NETPATH
REACTOME
REACT_11184
Neurotoxicity of clostridium toxins pathway
REACT_228211
Uptake and actions of bacterial toxins pathway
REACT_116125
Disease pathway
REACT_200658
Toxicity of botulinum toxin type C (BoNT/C) pathway
KEGG
hsa04130
SNARE interactions in vesicular transport pathway
mmu04130
SNARE interactions in vesicular transport pathway
INOH
PID NCI
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene Bt.4849
RefSeq NM_174618 XM_005224834
HUGO
OMIM
CCDS
HPRD
IMGT
EMBL
GenPept
RNA Seq Atlas

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca