Version 5.4
Bos taurus Gene: CCDC88B
Summary
InnateDB Gene IDBG-643936.3
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol CCDC88B
Gene Name coiled-coil domain-containing protein 88B precursor
Synonyms
Species Bos taurus
Ensembl Gene ENSBTAG00000040190
Encoded Proteins
IDBP-696535
coiled-coil domain containing 88B
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000168071:
This gene encodes a member of the hook-related protein family. Members of this family are characterized by an N-terminal potential microtubule binding domain, a central coiled-coiled and a C-terminal Hook-related domain. The encoded protein may be involved in linking organelles to microtubules. [provided by RefSeq, Oct 2009]
Gene Information
Type Protein coding
Genomic Location Chromosome 29:43250522-43265507
Strand Forward strand
Band
Transcripts
ENSBTAT00000053585 ENSBTAP00000051339
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 0 experimentally validated interaction(s) in this database.
They are also associated with 2 interaction(s) predicted by orthology.
Predicted by orthology
Total 2 [view]
Gene Ontology

Molecular Function
Accession GO Term
Biological Process
Cellular Component
GO:0016020 membrane
Orthologs
Species
Homo sapiens
Mus musculus
Gene ID
Gene Order
ENSG00000168071
View Gene Order
ENSMUSG00000047810
View Gene Order
Cross-References
SwissProt
TrEMBL F1MVD6
UniProt Splice Variant
Entrez Gene 510943
UniGene Bt.24431
RefSeq NM_001192279
HUGO
OMIM
CCDS
HPRD
IMGT
EMBL DAAA02063534
GenPept
RNA Seq Atlas 510943
Transcript Frequencies
Tag Count based mRNA-Abundances across 87 different Tissues (TPM).

Based on Data from Bovine Gene Atlas

Tag Count based mRNA-Abundances across 87 different Tissues (TPM)

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If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca