Version 5.4
Homo sapiens Gene: RAB38
Summary
InnateDB Gene IDBG-67123.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol RAB38
Gene Name RAB38, member RAS oncogene family
Synonyms NY-MEL-1; rrGTPbp
Species Homo sapiens
Ensembl Gene ENSG00000123892
Encoded Proteins
IDBP-67125
RAB38, member RAS oncogene family
IDBP-600737
RAB38, member RAS oncogene family
IDBP-584076
RAB38, member RAS oncogene family
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary Currently no Entrez Summary Available. You might want to check the Summary Sections of the Orthologs.
Gene Information
Type Protein coding
Genomic Location Chromosome 11:88113242-88175467
Strand Reverse strand
Band q14.2
Transcripts
ENST00000243662 ENSP00000243662
ENST00000531138 ENSP00000435340
ENST00000526372 ENSP00000433317
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 8 experimentally validated interaction(s) in this database.
They are also associated with 1 interaction(s) predicted by orthology.
Experimentally validated
Total 8 [view]
Protein-Protein 8 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 1 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0003924 GTPase activity
GO:0005515 protein binding
GO:0005525 GTP binding
GO:0030742 GTP-dependent protein binding
GO:0032403 protein complex binding
GO:0035650 AP-1 adaptor complex binding
GO:0035651 AP-3 adaptor complex binding
Biological Process
GO:0006184 GTP catabolic process
GO:0006886 intracellular protein transport
GO:0006913 nucleocytoplasmic transport
GO:0006996 organelle organization
GO:0007165 signal transduction
GO:0007264 small GTPase mediated signal transduction
GO:0015031 protein transport
GO:0032438 melanosome organization
GO:0035646 endosome to melanosome transport
GO:0060155 platelet dense granule organization
GO:0072657 protein localization to membrane
GO:0090383 phagosome acidification
Cellular Component
GO:0005622 intracellular
GO:0005634 nucleus
GO:0005737 cytoplasm
GO:0005769 early endosome
GO:0005783 endoplasmic reticulum
GO:0005794 Golgi apparatus
GO:0005829 cytosol
GO:0005886 plasma membrane
GO:0016020 membrane
GO:0030670 phagocytic vesicle membrane
GO:0031982 vesicle
GO:0042470 melanosome
GO:0045335 phagocytic vesicle
Orthologs
Species
Mus musculus
Bos taurus
Gene ID
Gene Order
ENSMUSG00000030559
View Gene Order
ENSBTAG00000015793
Not yet available
Pathways
NETPATH
REACTOME
KEGG
INOH
PID NCI
deltanp63pathway
Validated transcriptional targets of deltaNp63 isoforms
Cross-References
SwissProt P57729
TrEMBL A0A024R191
UniProt Splice Variant
Entrez Gene 23682
UniGene Hs.591975 Hs.604529
RefSeq NM_022337 XM_006718807
HUGO HGNC:9776
OMIM 606281
CCDS CCDS8281
HPRD
IMGT
EMBL AF235022 BC015808 BT009842 CH471185 DQ178619
GenPept AAG30731 AAH15808 AAP88844 ABA03166 EAW59365 EAW59366
RNA Seq Atlas 23682

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca