Version 5.4
Homo sapiens Gene: ZKSCAN3
Summary
InnateDB Gene IDBG-71974.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol ZKSCAN3
Gene Name zinc finger with KRAB and SCAN domains 3
Synonyms
Species Homo sapiens
Ensembl Gene ENSG00000189298
Encoded Proteins
IDBP-71976
zinc finger with KRAB and SCAN domains 3
IDBP-71978
zinc finger with KRAB and SCAN domains 3
IDBP-71980
zinc finger with KRAB and SCAN domains 3
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary Currently no Entrez Summary Available. You might want to check the Summary Sections of the Orthologs.
Gene Information
Type Protein coding
Genomic Location Chromosome 6:28349914-28369177
Strand Forward strand
Band p22.1
Transcripts
ENST00000252211 ENSP00000252211
ENST00000377255 ENSP00000366465
ENST00000341464 ENSP00000341883
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 5 experimentally validated interaction(s) in this database.
Experimentally validated
Total 5 [view]
Protein-Protein 5 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Gene Ontology

Molecular Function
Accession GO Term
GO:0003676 nucleic acid binding
GO:0003677 DNA binding
GO:0003682 chromatin binding
GO:0003700 sequence-specific DNA binding transcription factor activity
GO:0043565 sequence-specific DNA binding
GO:0046872 metal ion binding
Biological Process
GO:0006351 transcription, DNA-templated
GO:0006355 regulation of transcription, DNA-templated
GO:0006914 autophagy
GO:0007040 lysosome organization
GO:0010507 negative regulation of autophagy
GO:0045892 negative regulation of transcription, DNA-templated
GO:0045893 positive regulation of transcription, DNA-templated
GO:2000773 negative regulation of cellular senescence
Cellular Component
GO:0005622 intracellular
GO:0005634 nucleus
GO:0005737 cytoplasm
Orthologs
No orthologs found for this gene
Pathways
NETPATH
REACTOME
REACT_12627
Generic Transcription Pathway pathway
REACT_71
Gene Expression pathway
KEGG
INOH
PID NCI
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene Hs.380930 Hs.606130
RefSeq NM_001242894 NM_001242895 NM_024493 XM_005249424 XM_006715215 XM_006715218 XM_006715219
HUGO
OMIM
CCDS CCDS4650 CCDS56408
HPRD 11705
IMGT
EMBL
GenPept
RNA Seq Atlas

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca