Version 5.4
Homo sapiens Gene: NPLOC4
Summary
InnateDB Gene IDBG-72366.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol NPLOC4
Gene Name nuclear protein localization 4 homolog (S. cerevisiae)
Synonyms
Species Homo sapiens
Ensembl Gene ENSG00000182446
Encoded Proteins
IDBP-72368
nuclear protein localization 4 homolog (S. cerevisiae)
IDBP-72370
nuclear protein localization 4 homolog (S. cerevisiae)
IDBP-758918
IDBP-759340
IDBP-761670
IDBP-761023
IDBP-758889
IDBP-760261
IDBP-761507
IDBP-758126
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary Currently no Entrez Summary Available. You might want to check the Summary Sections of the Orthologs.
Gene Information
Type Protein coding
Genomic Location Chromosome 17:81556887-81648465
Strand Reverse strand
Band q25.3
Transcripts
ENST00000331134 ENSP00000331487
ENST00000374747 ENSP00000363879
ENST00000573212 ENSP00000459462
ENST00000574964
ENST00000574344
ENST00000576713
ENST00000570324 ENSP00000461478
ENST00000574095
ENST00000572824 ENSP00000458384
ENST00000571562
ENST00000572346
ENST00000574897 ENSP00000461543
ENST00000573328
ENST00000572351
ENST00000570300
ENST00000571714 ENSP00000460465
ENST00000572760 ENSP00000467400
ENST00000576940
ENST00000573519 ENSP00000459457
ENST00000573876 ENSP00000465247
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 91 experimentally validated interaction(s) in this database.
They are also associated with 3 interaction(s) predicted by orthology.
Experimentally validated
Total 91 [view]
Protein-Protein 90 [view]
Protein-DNA 0
Protein-RNA 1 [view]
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 3 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0005515 protein binding
GO:0008270 zinc ion binding
Biological Process
GO:0007030 Golgi organization
GO:0030433 ER-associated ubiquitin-dependent protein catabolic process
GO:0061025 membrane fusion
Cellular Component
GO:0005634 nucleus
GO:0005783 endoplasmic reticulum
GO:0005829 cytosol
GO:0042175 nuclear outer membrane-endoplasmic reticulum membrane network
Orthologs
Species
Mus musculus
Bos taurus
Gene ID
Gene Order
ENSMUSG00000039703
View Gene Order
ENSBTAG00000019105
Not yet available
Pathways
NETPATH
REACTOME
KEGG
hsa04141
Protein processing in endoplasmic reticulum pathway
INOH
PID NCI
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene Hs.569834 Hs.712727
RefSeq NM_017921
HUGO
OMIM
CCDS CCDS45812
HPRD 06975
IMGT
EMBL
GenPept
RNA Seq Atlas

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca