Version 5.4
Homo sapiens Gene: TRIM40
Summary
InnateDB Gene IDBG-75727.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol TRIM40
Gene Name tripartite motif containing 40
Synonyms
Species Homo sapiens
Ensembl Gene ENSG00000204614
Encoded Proteins
IDBP-75729
tripartite motif containing 40
IDBP-75731
tripartite motif containing 40
IDBP-237206
tripartite motif containing 40
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary Currently no Entrez Summary Available. You might want to check the Summary Sections of the Orthologs.
Gene Information
Type Protein coding
Genomic Location Chromosome 6:30136108-30148735
Strand Forward strand
Band p22.1
Transcripts
ENST00000376724 ENSP00000365914
ENST00000307859 ENSP00000308310
ENST00000396581 ENSP00000379826
ENST00000489892
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 7 experimentally validated interaction(s) in this database.
Experimentally validated
Total 7 [view]
Protein-Protein 7 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Gene Ontology

Molecular Function
Accession GO Term
GO:0000166 nucleotide binding
GO:0005515 protein binding
GO:0008270 zinc ion binding
GO:0046872 metal ion binding
Biological Process
GO:0030308 negative regulation of cell growth
GO:0032088 negative regulation of NF-kappaB transcription factor activity
GO:0042177 negative regulation of protein catabolic process
GO:0045116 protein neddylation
GO:1900181 negative regulation of protein localization to nucleus
GO:1901223 negative regulation of NIK/NF-kappaB signaling
Cellular Component
GO:0005622 intracellular
GO:0008385 IkappaB kinase complex
Orthologs
Species
Mus musculus
Bos taurus
Gene ID
Gene Order
ENSMUSG00000073399
View Gene Order
ENSBTAG00000037381
Not yet available
Cross-References
SwissProt Q6P9F5
TrEMBL
UniProt Splice Variant
Entrez Gene 135644
UniGene Hs.509439
RefSeq NM_001286633 NM_138700
HUGO HGNC:18736
OMIM
CCDS CCDS69069 CCDS4675
HPRD 15557
IMGT
EMBL AB110939 AB110940 AB202084 AF489517 AL669914 AL671859 BC060785 BX322644 BX927221 CH471081 CR788282
GenPept AAH60785 AAM09503 BAD13705 BAD13706 BAE78604 CAI18185 CAI18448 CAM24935 CAM25692 CAQ07454 CAQ07455 CAQ10306 CAQ10307 EAX03265 EAX03266
RNA Seq Atlas 135644

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca