InnateDB: Systems Biology of the Innate Immune Response

Homo sapiens Gene: CPEB3

Summary

InnateDB Gene

IDBG-82435.6

Last Modified

2014-10-13 [Report errors or provide feedback]

Gene Symbol

CPEB3

Gene Name

cytoplasmic polyadenylation element binding protein 3

Synonyms

Species

Homo sapiens

Ensembl Gene

ENSG00000107864

Encoded Proteins

IDBP-82437

cytoplasmic polyadenylation element binding protein 3

IDBP-382420

cytoplasmic polyadenylation element binding protein 3

IDBP-808034

cytoplasmic polyadenylation element binding protein 3

Protein Structure

Useful resources

Stemformatics EHFPI ImmGen

Entrez Gene

Summary

Currently no Entrez Summary Available. You might want to check the Summary Sections of the Orthologs.

Gene Information

Type

Protein coding

Genomic Location

Chromosome 10:92046692-92291087

Strand

Reverse strand

Band

q23.32

Transcripts

ENST00000265997	ENSP00000265997
ENST00000412050	ENSP00000398310
ENST00000614585	ENSP00000482128

Interactions

Number of Interactions

This gene and/or its encoded proteins are associated with 4 experimentally validated interaction(s) in this database.
They are also associated with 2 interaction(s) predicted by orthology.

Experimentally validated
Total	4 [view]
Protein-Protein	4 [view]
Protein-DNA	0
Protein-RNA	0
DNA-DNA	0
RNA-RNA	0
DNA-RNA	0

Predicted by orthology
Total	2 [view]

Gene Ontology

Molecular Function

Accession	GO Term
GO:0000166	nucleotide binding
GO:0000900	translation repressor activity, nucleic acid binding
GO:0003676	nucleic acid binding
GO:0003723	RNA binding
GO:0003730	mRNA 3'-UTR binding
GO:0005515	protein binding
GO:0008135	translation factor activity, nucleic acid binding
GO:0035613	RNA stem-loop binding
GO:0035925	mRNA 3'-UTR AU-rich region binding
GO:0044822	poly(A) RNA binding

Biological Process

GO:0000122	negative regulation of transcription from RNA polymerase II promoter
GO:0006412	translation
GO:0007616	long-term memory
GO:0017148	negative regulation of translation
GO:0045727	positive regulation of translation
GO:0048167	regulation of synaptic plasticity
GO:0060213	positive regulation of nuclear-transcribed mRNA poly(A) tail shortening
GO:0060998	regulation of dendritic spine development
GO:0060999	positive regulation of dendritic spine development
GO:0061158	3'-UTR-mediated mRNA destabilization
GO:0071230	cellular response to amino acid stimulus
GO:1900153	positive regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay
GO:1900248	negative regulation of cytoplasmic translational elongation
GO:1900365	positive regulation of mRNA polyadenylation

Cellular Component

GO:0005634	nucleus
GO:0005737	cytoplasm
GO:0030014	CCR4-NOT complex
GO:0030425	dendrite
GO:0043005	neuron projection
GO:0045202	synapse
GO:0097440	apical dendrite

Orthologs

Species

Mus musculus

Bos taurus

Gene ID

Gene Order

ENSMUSG00000039652

View Gene Order

ENSBTAG00000015450

Not yet available

Pathways

NETPATH

REACTOME

KEGG

hsa04320

Dorso-ventral axis formation pathway

hsa04914

Progesterone-mediated oocyte maturation pathway

hsa04114

Oocyte meiosis pathway

INOH

PID NCI

Cross-References

SwissProt

Q8NE35

TrEMBL

Q5QP71

UniProt Splice Variant

Entrez Gene

22849

UniGene

Hs.131683 Hs.624441 Hs.701732

RefSeq

NM_001178137 XM_005269630 NM_014912

HUGO

HGNC:21746

OMIM

610606

CCDS

CCDS53553 CCDS31246

HPRD

16745

IMGT

EMBL

AB023157 AK302576 AL158040 AL365398 BC036444 CH471066

GenPept

AAH36444 BAA76784 BAH13751 CAI13636 CAI14104 EAW50097

RNA Seq Atlas

22849