Version 5.4
Homo sapiens Gene: SAMD11
Summary
InnateDB Gene IDBG-84149.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol SAMD11
Gene Name sterile alpha motif domain containing 11
Synonyms
Species Homo sapiens
Ensembl Gene ENSG00000187634
Encoded Proteins
IDBP-84151
sterile alpha motif domain containing 11
IDBP-84153
sterile alpha motif domain containing 11
IDBP-360849
sterile alpha motif domain containing 11
IDBP-360851
sterile alpha motif domain containing 11
IDBP-360855
sterile alpha motif domain containing 11
IDBP-806574
sterile alpha motif domain containing 11
IDBP-806578
sterile alpha motif domain containing 11
IDBP-806579
sterile alpha motif domain containing 11
IDBP-806583
sterile alpha motif domain containing 11
IDBP-806595
sterile alpha motif domain containing 11
IDBP-806599
sterile alpha motif domain containing 11
IDBP-806623
sterile alpha motif domain containing 11
IDBP-806624
sterile alpha motif domain containing 11
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary Currently no Entrez Summary Available. You might want to check the Summary Sections of the Orthologs.
Gene Information
Type Protein coding
Genomic Location Chromosome 1:924880-944581
Strand Forward strand
Band p36.33
Transcripts
ENST00000341065 ENSP00000349216
ENST00000342066 ENSP00000342313
ENST00000420190 ENSP00000411579
ENST00000437963 ENSP00000393181
ENST00000455979 ENSP00000412228
ENST00000478729
ENST00000474461
ENST00000466827
ENST00000464948
ENST00000618323 ENSP00000480678
ENST00000618779 ENSP00000484256
ENST00000620200 ENSP00000484820
ENST00000617307 ENSP00000482090
ENST00000622503 ENSP00000482138
ENST00000616125 ENSP00000484643
ENST00000616016 ENSP00000478421
ENST00000618181 ENSP00000480870
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 0 experimentally validated interaction(s) in this database.
Gene Ontology

Molecular Function
Accession GO Term
GO:0003713 transcription coactivator activity
GO:0005515 protein binding
GO:0032093 SAM domain binding
GO:0042731 PH domain binding
GO:0043621 protein self-association
Biological Process
GO:0000122 negative regulation of transcription from RNA polymerase II promoter
Cellular Component
GO:0005634 nucleus
Orthologs
Species
Bos taurus
Mus musculus
Gene ID
Gene Order
Method
Confidence
Comments
ENSBTAG00000008739
Not yet available
Ortholuge
SSD Ortholog
Ortholog supports species divergence
ENSMUSG00000096351
View Gene Order
Ortholuge
SSD Ortholog
Ortholog supports species divergence
Cross-References
SwissProt
TrEMBL A6PWC8 I7FV93 Q5SV95
UniProt Splice Variant
Entrez Gene 148398
UniGene
RefSeq NM_152486
HUGO HGNC:28706
OMIM
CCDS CCDS2
HPRD
IMGT
EMBL AL645608 JX093091
GenPept AFP36442
RNA Seq Atlas 148398

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca