Version 5.4
Homo sapiens Gene: SCMH1
Summary
InnateDB Gene IDBG-97118.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol SCMH1
Gene Name sex comb on midleg homolog 1 (Drosophila)
Synonyms Scml3
Species Homo sapiens
Ensembl Gene ENSG00000010803
Encoded Proteins
IDBP-97120
sex comb on midleg homolog 1 (Drosophila)
IDBP-97122
sex comb on midleg homolog 1 (Drosophila)
IDBP-97124
sex comb on midleg homolog 1 (Drosophila)
IDBP-97126
sex comb on midleg homolog 1 (Drosophila)
IDBP-97128
sex comb on midleg homolog 1 (Drosophila)
IDBP-97130
sex comb on midleg homolog 1 (Drosophila)
IDBP-97132
sex comb on midleg homolog 1 (Drosophila)
IDBP-235920
sex comb on midleg homolog 1 (Drosophila)
IDBP-235922
sex comb on midleg homolog 1 (Drosophila)
IDBP-293141
sex comb on midleg homolog 1 (Drosophila)
IDBP-381539
sex comb on midleg homolog 1 (Drosophila)
IDBP-812367
sex comb on midleg homolog 1 (Drosophila)
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary Currently no Entrez Summary Available. You might want to check the Summary Sections of the Orthologs.
Gene Information
Type Protein coding
Genomic Location Chromosome 1:41027200-41242154
Strand Reverse strand
Band p34.2
Transcripts
ENST00000372596 ENSP00000361677
ENST00000372597 ENSP00000361678
ENST00000337495 ENSP00000337352
ENST00000372595 ENSP00000361676
ENST00000361191 ENSP00000354656
ENST00000361705 ENSP00000354996
ENST00000326197 ENSP00000318094
ENST00000397174 ENSP00000380359
ENST00000397171 ENSP00000380356
ENST00000402904 ENSP00000386079
ENST00000456518 ENSP00000403974
ENST00000472037 ENSP00000479881
ENST00000460215
ENST00000498793
ENST00000489421
ENST00000482530
ENST00000488592
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 24 experimentally validated interaction(s) in this database.
They are also associated with 4 interaction(s) predicted by orthology.
Experimentally validated
Total 24 [view]
Protein-Protein 24 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 4 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0003677 DNA binding
GO:0003700 sequence-specific DNA binding transcription factor activity
GO:0005515 protein binding
GO:0043565 sequence-specific DNA binding
Biological Process
GO:0006338 chromatin remodeling
GO:0006351 transcription, DNA-templated
GO:0006355 regulation of transcription, DNA-templated
GO:0007283 spermatogenesis
GO:0009653 anatomical structure morphogenesis
GO:0009952 anterior/posterior pattern specification
GO:0016458 gene silencing
GO:0045892 negative regulation of transcription, DNA-templated
Cellular Component
GO:0005634 nucleus
GO:0005654 nucleoplasm
GO:0010369 chromocenter
Orthologs
Species
Mus musculus
Bos taurus
Gene ID
Gene Order
ENSMUSG00000000085
View Gene Order
ENSBTAG00000001629
Not yet available
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene Hs.571874
RefSeq NM_001031694 NM_001172218 NM_001172219 NM_001172220 NM_001172221 NM_001172222 NM_012236 XM_005270639 XM_006710462 XM_006710463 XM_006710464 XM_006710465 XM_006710466 XM_006710467 XM_006710468 XM_006710469 XM_006710470
HUGO
OMIM
CCDS CCDS30688 CCDS461 CCDS53301 CCDS53302 CCDS53303 CCDS53304
HPRD 11540
IMGT
EMBL
GenPept
RNA Seq Atlas

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca