Version 5.4
Homo sapiens Gene: TTC39A
Summary
InnateDB Gene IDBG-98454.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol TTC39A
Gene Name tetratricopeptide repeat domain 39A
Synonyms C1orf34; DEME-6
Species Homo sapiens
Ensembl Gene ENSG00000085831
Encoded Proteins
IDBP-51009
tetratricopeptide repeat domain 39A
IDBP-98456
tetratricopeptide repeat domain 39A
IDBP-98458
tetratricopeptide repeat domain 39A
IDBP-98460
tetratricopeptide repeat domain 39A
IDBP-98462
tetratricopeptide repeat domain 39A
IDBP-226741
tetratricopeptide repeat domain 39A
IDBP-383948
tetratricopeptide repeat domain 39A
IDBP-383950
tetratricopeptide repeat domain 39A
IDBP-383956
tetratricopeptide repeat domain 39A
IDBP-383959
tetratricopeptide repeat domain 39A
IDBP-383962
tetratricopeptide repeat domain 39A
IDBP-599413
tetratricopeptide repeat domain 39A
IDBP-594814
tetratricopeptide repeat domain 39A
IDBP-585861
tetratricopeptide repeat domain 39A
IDBP-592888
tetratricopeptide repeat domain 39A
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary Currently no Entrez Summary Available. You might want to check the Summary Sections of the Orthologs.
Gene Information
Type Protein coding
Genomic Location Chromosome 1:51287258-51345116
Strand Reverse strand
Band p32.3
Transcripts
ENST00000380849 ENSP00000370230
ENST00000262675 ENSP00000262675
ENST00000371750 ENSP00000360815
ENST00000371747 ENSP00000360812
ENST00000262676 ENSP00000262676
ENST00000401051 ENSP00000383830
ENST00000413473 ENSP00000406144
ENST00000447632 ENSP00000393952
ENST00000431927
ENST00000411642 ENSP00000408532
ENST00000439482 ENSP00000405803
ENST00000422925 ENSP00000388995
ENST00000530004 ENSP00000431228
ENST00000534098
ENST00000525906 ENSP00000436659
ENST00000524442
ENST00000532836 ENSP00000434483
ENST00000527205 ENSP00000432453
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 0 experimentally validated interaction(s) in this database.
Gene Ontology

Molecular Function
Accession GO Term
GO:0003674 molecular_function
GO:0005515 protein binding
Biological Process
GO:0008150 biological_process
Cellular Component
GO:0005575 cellular_component
Orthologs
Species
Mus musculus
Bos taurus
Gene ID
Gene Order
ENSMUSG00000028555
View Gene Order
ENSBTAG00000002451
Not yet available
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene Hs.112949
RefSeq NM_001080494 NM_001144832 NM_001297662 NM_001297663 NM_001297664 NM_001297665 NM_001297666 XM_005270641 XM_005270644 XM_005270645 XM_005270646 XM_006710471
HUGO
OMIM
CCDS CCDS44143 CCDS44144 CCDS72789 CCDS72790
HPRD
IMGT
EMBL
GenPept
RNA Seq Atlas

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca