Version 5.4
Homo sapiens Gene: PHF10
Summary
InnateDB Gene IDBG-99249.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol PHF10
Gene Name PHD finger protein 10
Synonyms
Species Homo sapiens
Ensembl Gene ENSG00000130024
Encoded Proteins
IDBP-99253
PHD finger protein 10
IDBP-99255
PHD finger protein 10
IDBP-812974
PHD finger protein 10
IDBP-812976
PHD finger protein 10
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene contains a predicted ORF that encodes a protein with two zinc finger domains. The function of the encoded protein is not known. Sequence analysis suggests that multiple alternatively spliced transcript variants are derived from this gene but the full-length nature of only two of them is known. These two splice variants encode different isoforms. A pseudogene for this gene is located on Xq28. [provided by RefSeq, Jul 2008]
Gene Information
Type Protein coding
Genomic Location Chromosome 6:169703905-169725566
Strand Reverse strand
Band q27
Transcripts
ENST00000339209 ENSP00000341805
ENST00000366780 ENSP00000355743
ENST00000480008
ENST00000464779
ENST00000612128 ENSP00000479515
ENST00000621772 ENSP00000484117
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 27 experimentally validated interaction(s) in this database.
They are also associated with 2 interaction(s) predicted by orthology.
Experimentally validated
Total 27 [view]
Protein-Protein 27 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 2 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0005515 protein binding
GO:0008270 zinc ion binding
Biological Process
GO:0006351 transcription, DNA-templated
GO:0006355 regulation of transcription, DNA-templated
GO:0007399 nervous system development
Cellular Component
GO:0071564 npBAF complex
Orthologs
Species
Mus musculus
Bos taurus
Gene ID
Gene Order
ENSMUSG00000023883
View Gene Order
ENSBTAG00000003929
Not yet available
Cross-References
SwissProt Q8WUB8
TrEMBL S5FMB0 S5FQ49 S5FZ81
UniProt Splice Variant
Entrez Gene 55274
UniGene Hs.435933 Hs.604943 Hs.627917
RefSeq NM_018288 NM_133325
HUGO HGNC:18250
OMIM 613069
CCDS CCDS5308 CCDS5309
HPRD
IMGT
EMBL AF338735 AK001837 AK222612 AL513547 BC020954 BC110323 CR457273 KC839988 KC839989 KC839990
GenPept AAH20954 AAI10324 AAK27451 AGQ46690 AGQ46691 AGQ46692 BAA91934 BAD96332 CAG33554 CAI12316
RNA Seq Atlas 55274

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca