Version 5.4
Homo sapiens Protein: RPS4Y1
Summary
InnateDB Protein IDBP-10.5
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol RPS4Y1
Protein Name ribosomal protein S4, Y-linked 1
Synonyms
Species Homo sapiens
Ensembl Protein ENSP00000250784
InnateDB Gene IDBG-6 (RPS4Y1)
Protein Structure
UniProt Annotation
Function
Subcellular Localization
Disease Associations
Tissue Specificity
Comments
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 8 experimentally validated interaction(s) in this database.
Experimentally validated
Total 8 [view]
Protein-Protein 8 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Gene Ontology

Molecular Function
Accession GO Term
GO:0003723 RNA binding
GO:0003735 structural constituent of ribosome
GO:0019843 rRNA binding
Biological Process
GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0006412 translation
GO:0006413 translational initiation
GO:0006414 translational elongation
GO:0006415 translational termination
GO:0006614 SRP-dependent cotranslational protein targeting to membrane
GO:0007275 multicellular organismal development
GO:0010467 gene expression
GO:0016032 viral process
GO:0016070 RNA metabolic process
GO:0016071 mRNA metabolic process
GO:0019058 viral life cycle
GO:0019083 viral transcription
GO:0044267 cellular protein metabolic process
Cellular Component
GO:0005622 intracellular
GO:0005634 nucleus
GO:0005829 cytosol
GO:0005840 ribosome
GO:0005844 polysome
GO:0016020 membrane
GO:0022627 cytosolic small ribosomal subunit
Protein Structure and Domains
PDB ID
InterPro IPR000876 Ribosomal protein S4e
IPR002942 RNA-binding S4 domain
IPR005824 KOW
IPR013843 Ribosomal protein S4e, N-terminal
IPR013845 Ribosomal protein S4e, central region
PFAM PF01479
PF00467
PF08071
PF00900
PRINTS
PIRSF PIRSF002116
SMART SM00363
SM00739
TIGRFAMs
Post-translational Modifications
Modification
Cross-References
SwissProt P22090
PhosphoSite PhosphoSite-P22090
TrEMBL
UniProt Splice Variant
Entrez Gene 6192
UniGene
RefSeq NP_000999
HUGO HGNC:10425
OMIM 470000
CCDS CCDS14773
HPRD 15963
IMGT
EMBL AF041427 AF116711 AK292819 BC010286 CH471115 M58459
GenPept AAA63256 AAB96967 AAF71131 AAH10286 BAF85508 EAX02771

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca