Version 5.4
Mus musculus Protein: Clrn1
Summary
InnateDB Protein IDBP-146587.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Clrn1
Protein Name clarin 1
Synonyms
Species Mus musculus
Ensembl Protein ENSMUSP00000052254
InnateDB Gene IDBG-146585 (Clrn1)
Protein Structure
UniProt Annotation
Function May have a role in the excitatory ribbon synapse junctions between hair cells and cochlear ganglion cells and presumably also in analogous synapses within the retina. {ECO:0000269PubMed:12080385}.
Subcellular Localization Membrane {ECO:0000305}; Multi-pass membrane protein {ECO:0000305}.
Disease Associations
Tissue Specificity
Comments
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 0 experimentally validated interaction(s) in this database.
Gene Ontology

Molecular Function
Accession GO Term
Biological Process
GO:0007015 actin filament organization
GO:0007601 visual perception
GO:0007605 sensory perception of sound
GO:0010592 positive regulation of lamellipodium assembly
GO:0048870 cell motility
GO:0050885 neuromuscular process controlling balance
GO:0050896 response to stimulus
GO:0060088 auditory receptor cell stereocilium organization
GO:0060117 auditory receptor cell development
Cellular Component
GO:0005886 plasma membrane
GO:0005902 microvillus
GO:0016021 integral component of membrane
GO:0030027 lamellipodium
Protein Structure and Domains
PDB ID MGI:2388124
InterPro
PFAM
PRINTS
PIRSF
SMART
TIGRFAMs
Post-translational Modifications
Modification
Cross-References
SwissProt Q8K445
PhosphoSite PhosphoSite-Q8K445
TrEMBL Q8BYX9
UniProt Splice Variant
Entrez Gene 229320
UniGene Mm.131502
RefSeq NP_700433
MGI ID
MGI Symbol Clrn1
OMIM
CCDS CCDS38439
HPRD
IMGT
EMBL AF495718 AF495719 AK037267
GenPept AAM88775 AAM88776 BAC29781

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca