InnateDB: Systems Biology of the Innate Immune Response

Mus musculus Protein: Zcchc11

Summary

InnateDB Protein

IDBP-172868.5

Last Modified

2012-02-14 [Report errors or provide feedback]

Gene Symbol

Zcchc11

Protein Name

zinc finger, CCHC domain containing 11

Synonyms

Species

Mus musculus

Ensembl Protein

ENSMUSP00000095538

InnateDB Gene

IDBG-172864 (Zcchc11)

Protein Structure

UniProt Annotation

Function

Subcellular Localization

Disease Associations

Tissue Specificity

Comments

Interactions

Number of Interactions

This gene and/or its encoded proteins are associated with 4 experimentally validated interaction(s) in this database.
They are also associated with 10 interaction(s) predicted by orthology.

Experimentally validated
Total	4 [view]
Protein-Protein	4 [view]
Protein-DNA	0
Protein-RNA	0
DNA-DNA	0
RNA-RNA	0
DNA-RNA	0

Predicted by orthology
Total	10 [view]

Gene Ontology

Molecular Function

Accession	GO Term
GO:0003676	nucleic acid binding
GO:0005515	protein binding
GO:0008270	zinc ion binding
GO:0016779	nucleotidyltransferase activity
GO:0044822	poly(A) RNA binding
GO:0050265	RNA uridylyltransferase activity

Biological Process

GO:0001816	cytokine production
GO:0008152	metabolic process
GO:0010587	miRNA catabolic process
GO:0019827	stem cell maintenance
GO:0031054	pre-miRNA processing
GO:0031123	RNA 3'-end processing
GO:0031664	regulation of lipopolysaccharide-mediated signaling pathway
GO:0032088	negative regulation of NF-kappaB transcription factor activity

Cellular Component

GO:0005615	extracellular space
GO:0005634	nucleus
GO:0005730	nucleolus
GO:0005737	cytoplasm
GO:0070062	extracellular vesicular exosome

Protein Structure and Domains

PDB ID

MGI:2445126

InterPro

IPR001878 Zinc finger, CCHC-type
IPR002058 PAP/25A-associated
IPR002934 Nucleotidyl transferase domain

PFAM

PF00098
PF03828
PF01909

PRINTS

PIRSF

SMART

SM00343

TIGRFAMs

Post-translational Modifications

Modification

Cross-References

SwissProt

PhosphoSite

PhosphoSite-

TrEMBL

Q9EQN6

UniProt Splice Variant

Entrez Gene

230594

UniGene

Mm.416791

RefSeq

XP_006503040

MGI ID

MGI Symbol

Zcchc11

OMIM

CCDS

HPRD

IMGT

EMBL

AF194972 AK049279 AL626783 AL627238

GenPept

AAG38482 BAC33655