InnateDB: Systems Biology of the Innate Immune Response

Homo sapiens Protein: GCFC1

Summary

InnateDB Protein

IDBP-1821.6

Last Modified

2014-10-13 [Report errors or provide feedback]

Gene Symbol

GCFC1

Protein Name

GC-rich sequence DNA-binding factor 1

Synonyms

Species

Homo sapiens

Ensembl Protein

ENSP00000328992

InnateDB Gene

IDBG-1817 (GCFC1)

Protein Structure

UniProt Annotation

Function

Subcellular Localization

Disease Associations

Tissue Specificity

Comments

Interactions

Number of Interactions

This gene and/or its encoded proteins are associated with 9 experimentally validated interaction(s) in this database.

Experimentally validated
Total	9 [view]
Protein-Protein	9 [view]
Protein-DNA	0
Protein-RNA	0
DNA-DNA	0
RNA-RNA	0
DNA-RNA	0

Gene Ontology

Molecular Function

Accession	GO Term
GO:0003677	DNA binding
GO:0003700	sequence-specific DNA binding transcription factor activity
GO:0005515	protein binding
GO:0008134	transcription factor binding

Biological Process

GO:0006351	transcription, DNA-templated
GO:0006355	regulation of transcription, DNA-templated
GO:0007517	muscle organ development
GO:0014842	regulation of satellite cell proliferation
GO:0031062	positive regulation of histone methylation
GO:0045944	positive regulation of transcription from RNA polymerase II promoter
GO:2000288	positive regulation of myoblast proliferation

Cellular Component

GO:0005634	nucleus
GO:0005829	cytosol

Protein Structure and Domains

PDB ID

InterPro

IPR022783 GC-rich sequence DNA-binding factor domain

PFAM

PF07842

PRINTS

PIRSF

SMART

TIGRFAMs

Post-translational Modifications

Modification

Cross-References

SwissProt

PhosphoSite

PhosphoSite-Q9Y5B6

TrEMBL

UniProt Splice Variant

Entrez Gene

UniGene

RefSeq

HUGO

OMIM

CCDS

HPRD

IMGT

EMBL

AF153208 AF208862 AF231920 AJ279080 AJ279081 AK075042 AK128513 AY033903 AY033904 AY033905 AY033906 BC030539 CH471079

GenPept

AAD34617 AAF64276 AAF72944 AAH30539 AAK68721 AAK68722 AAK68723 AAK68724 BAC11369 BAG54687 CAC40813 CAC40814 EAX09859 EAX09861

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1)

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca