InnateDB Protein
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IDBP-190418.6
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Last Modified
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2014-10-13 [Report errors or provide feedback]
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Gene Symbol
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Yod1
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Protein Name
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YOD1 OTU deubiquitinating enzyme 1 homologue (S. cerevisiae)
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Synonyms
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Species
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Mus musculus
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Ensembl Protein
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ENSMUSP00000055318
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InnateDB Gene
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IDBG-190416 (Yod1)
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Protein Structure
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Function |
Hydrolase that can remove conjugated ubiquitin from proteins and participates in endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by triming the ubiquitin chain on the associated substrate to facilitate their threading through the VCP/p97 pore. Ubiquitin moieties on substrates may present a steric impediment to the threading process when the substrate is transferred to the VCP pore and threaded through VCP's axial channel. Mediates deubiquitination of 'Lys-27'-, 'Lys-29'- and 'Lys-33'-linked polyubiquitin chains. Also able to hydrolyze 'Lys-11'-linked ubiquitin chains. Cleaves both polyubiquitin and di-ubiquitin (By similarity). {ECO:0000250}.
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Subcellular Localization |
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Disease Associations |
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Tissue Specificity |
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Comments |
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Number of Interactions
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This gene and/or its encoded proteins are associated with 0 experimentally validated interaction(s) in this database.
They are also associated with 13 interaction(s) predicted by orthology.
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Predicted by orthology |
Total |
13 [view]
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Molecular Function |
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Biological Process |
GO:0006520
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cellular amino acid metabolic process
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GO:0030433
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ER-associated ubiquitin-dependent protein catabolic process
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GO:0030968
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endoplasmic reticulum unfolded protein response
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GO:0035523
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protein K29-linked deubiquitination
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GO:0035871
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protein K11-linked deubiquitination
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GO:0070536
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protein K63-linked deubiquitination
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GO:0071108
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protein K48-linked deubiquitination
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GO:1990167
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protein K27-linked deubiquitination
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GO:1990168
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protein K33-linked deubiquitination
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Cellular Component |
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PDB ID |
MGI:2442596
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InterPro |
IPR003323
Ovarian tumour, otubain
IPR029071
Ubiquitin-related domain
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PFAM |
PF02338
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PRINTS |
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PIRSF |
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SMART |
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TIGRFAMs |
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Modification |
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SwissProt |
Q8CB27
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PhosphoSite |
PhosphoSite-Q8CB27
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TrEMBL |
A4FTZ0
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UniProt Splice Variant |
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Entrez Gene |
226418
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UniGene |
Mm.466520
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RefSeq |
NP_848806
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MGI ID |
2KZR
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MGI Symbol |
Yod1
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OMIM |
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CCDS |
CCDS48351
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HPRD |
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IMGT |
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EMBL |
AK036938
AK036991
AK053730
BC099948
BC139034
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GenPept |
AAH99948
AAI39035
BAC29646
BAC29661
BAC35495
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