Version 5.4
Mus musculus Protein: Rrp9
Summary
InnateDB Protein IDBP-196346.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Rrp9
Protein Name RRP9, small subunit (SSU) processome component, homolog (yeast)
Synonyms 55kDa; D19435; D9Wsu10e; Rnu3ip2; U3-55k;
Species Mus musculus
Ensembl Protein ENSMUSP00000038580
InnateDB Gene IDBG-196344 (Rrp9)
Protein Structure
UniProt Annotation
Function Component of a nucleolar small nuclear ribonucleoprotein particle (snoRNP) thought to participate in the processing and modification of pre-ribosomal RNA. {ECO:0000250}.
Subcellular Localization Nucleus, nucleolus {ECO:0000250}.
Disease Associations
Tissue Specificity
Comments
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 7 experimentally validated interaction(s) in this database.
They are also associated with 12 interaction(s) predicted by orthology.
Experimentally validated
Total 7 [view]
Protein-Protein 7 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 12 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0003723 RNA binding
GO:0005515 protein binding
GO:0044822 poly(A) RNA binding
Biological Process
GO:0006364 rRNA processing
GO:0008150 biological_process
Cellular Component
GO:0005634 nucleus
GO:0005730 nucleolus
GO:0030529 ribonucleoprotein complex
Protein Structure and Domains
PDB ID MGI:2384313
InterPro IPR001680 WD40 repeat
IPR017986 WD40-repeat-containing domain
IPR020472 G-protein beta WD-40 repeat
PFAM PF00400
PRINTS PR00320
PIRSF
SMART SM00320
TIGRFAMs
Post-translational Modifications
Modification
Cross-References
SwissProt Q91WM3
PhosphoSite PhosphoSite-Q91WM3
TrEMBL
UniProt Splice Variant
Entrez Gene 27966
UniGene Mm.239997
RefSeq NP_663595
MGI ID
MGI Symbol Rrp9
OMIM
CCDS CCDS23481
HPRD
IMGT
EMBL AF368232 AF368234 AK076113 BC014703
GenPept AAH14703 AAN62792 AAN62794 BAC36193

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca