Version 5.4
Mus musculus Protein: Vps25
Summary
InnateDB Protein IDBP-212000.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Vps25
Protein Name vacuolar protein sorting 25 (yeast)
Synonyms 1110020N13Rik; AW107467; D11Wsu68e;
Species Mus musculus
Ensembl Protein ENSMUSP00000042088
InnateDB Gene IDBG-267009 (Vps25)
Protein Structure
UniProt Annotation
Function Component of the ESCRT-II complex (endosomal sorting complex required for transport II), which is required for multivesicular body (MVB) formation and sorting of endosomal cargo proteins into MVBs. The MVB pathway mediates delivery of transmembrane proteins into the lumen of the lysosome for degradation. The ESCRT-II complex is probably involved in the recruitment of the ESCRT-III complex. The ESCRT-II complex may also play a role in transcription regulation, possibly via its interaction with ELL (By similarity). {ECO:0000250}.
Subcellular Localization Cytoplasm {ECO:0000250}. Endosome membrane {ECO:0000250}. Nucleus {ECO:0000250}. Note=Distributes diffusely throughout the cytoplasm and nucleoplasm, but exhibits a punctate distribution on coexpression with CHMP6. {ECO:0000250}.
Disease Associations
Tissue Specificity
Comments
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 2 experimentally validated interaction(s) in this database.
They are also associated with 13 interaction(s) predicted by orthology.
Experimentally validated
Total 2 [view]
Protein-Protein 2 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 13 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0003674 molecular_function
GO:0005515 protein binding
GO:0042803 protein homodimerization activity
Biological Process
GO:0006351 transcription, DNA-templated
GO:0006355 regulation of transcription, DNA-templated
GO:0015031 protein transport
Cellular Component
GO:0005634 nucleus
GO:0005730 nucleolus
GO:0005739 mitochondrion
GO:0010008 endosome membrane
GO:0070062 extracellular vesicular exosome
Protein Structure and Domains
PDB ID MGI:106354
InterPro IPR008570 ESCRT-II complex, vps25 subunit
PFAM PF05871
PRINTS
PIRSF
SMART
TIGRFAMs
Post-translational Modifications
Modification
Cross-References
SwissProt Q9CQ80
PhosphoSite PhosphoSite-
TrEMBL A8XY17
UniProt Splice Variant
Entrez Gene 28084
UniGene
RefSeq NP_081052
MGI ID
MGI Symbol Vps25
OMIM
CCDS CCDS25458
HPRD
IMGT
EMBL AK002500 AK003715 AK003877 AK145811 AK150822 AK166008 AL590969 BC029181
GenPept AAH29181 BAB22148 BAB22955 BAB23054 BAE26665 BAE29884 BAE38516 CAM19564 CAM19566

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca