InnateDB Protein
|
IDBP-241544.5
|
Last Modified
|
2014-10-13 [Report errors or provide feedback]
|
Gene Symbol
|
GTF2F1
|
Protein Name
|
general transcription factor IIF, polypeptide 1, 74kDa
|
Synonyms
|
BTF4; RAP74; TF2F1; TFIIF;
|
Species
|
Homo sapiens
|
Ensembl Protein
|
ENSP00000377969
|
InnateDB Gene
|
IDBG-21234 (GTF2F1)
|
Protein Structure
|
|
Function |
TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. {ECO:0000269PubMed:10428810}.
|
Subcellular Localization |
Nucleus.
|
Disease Associations |
|
Tissue Specificity |
|
Comments |
|
Number of Interactions
|
This gene and/or its encoded proteins are associated with 82 experimentally validated interaction(s) in this database.
They are also associated with 1 interaction(s) predicted by orthology.
Experimentally validated |
Total |
82
[view]
|
Protein-Protein |
81
[view]
|
Protein-DNA |
1
[view]
|
Protein-RNA |
0
|
DNA-DNA |
0
|
RNA-RNA |
0
|
DNA-RNA |
0
|
|
Predicted by orthology |
Total |
1 [view]
|
|
|
Molecular Function |
|
Biological Process |
GO:0000398
|
mRNA splicing, via spliceosome
|
GO:0006366
|
transcription from RNA polymerase II promoter
|
GO:0006367
|
transcription initiation from RNA polymerase II promoter
|
GO:0006368
|
transcription elongation from RNA polymerase II promoter
|
GO:0006370
|
7-methylguanosine mRNA capping
|
GO:0008380
|
RNA splicing
|
GO:0009615
|
response to virus
|
GO:0010467
|
gene expression
|
GO:0016032
|
viral process
|
GO:0032968
|
positive regulation of transcription elongation from RNA polymerase II promoter
|
GO:0043085
|
positive regulation of catalytic activity
|
GO:0045944
|
positive regulation of transcription from RNA polymerase II promoter
|
GO:0050434
|
positive regulation of viral transcription
|
|
Cellular Component |
|
PDB ID |
|
InterPro |
IPR008851
Transcription initiation factor IIF, alpha subunit
IPR011039
Transcription Factor IIF, Rap30/Rap74, interaction
|
PFAM |
PF05793
|
PRINTS |
|
PIRSF |
|
SMART |
|
TIGRFAMs |
|
Modification |
|
SwissProt |
P35269
|
PhosphoSite |
PhosphoSite-P35269
|
TrEMBL |
M0R0Z3
|
UniProt Splice Variant |
|
Entrez Gene |
2962
|
UniGene |
Hs.68257
|
RefSeq |
NP_002087
|
HUGO |
HGNC:4652
|
OMIM |
189968
|
CCDS |
CCDS12165
|
HPRD |
01803
|
IMGT |
|
EMBL |
AC011491
AK315240
BC000120
BC013007
BT007097
CH471139
X64002
X64037
|
GenPept |
AAH00120
AAH13007
AAP35761
BAG37667
CAA45404
CAA45408
EAW69098
|
|
|