Version 5.4
Homo sapiens Protein: ZMAT5
Summary
InnateDB Protein IDBP-3851.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol ZMAT5
Protein Name zinc finger, matrin-type 5
Synonyms
Species Homo sapiens
Ensembl Protein ENSP00000344241
InnateDB Gene IDBG-3849 (ZMAT5)
Protein Structure
UniProt Annotation
Function
Subcellular Localization Nucleus {ECO:0000269PubMed:15146077}.
Disease Associations
Tissue Specificity
Comments
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 6 experimentally validated interaction(s) in this database.
Experimentally validated
Total 6 [view]
Protein-Protein 5 [view]
Protein-DNA 1 [view]
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Gene Ontology

Molecular Function
Accession GO Term
GO:0008270 zinc ion binding
GO:0046872 metal ion binding
Biological Process
GO:0006397 mRNA processing
GO:0008380 RNA splicing
Cellular Component
GO:0005634 nucleus
GO:0005689 U12-type spliceosomal complex
Protein Structure and Domains
PDB ID
InterPro IPR000571 Zinc finger, CCCH-type
IPR013085 Zinc finger, U1-C type
PFAM PF00642
PF06220
PRINTS
PIRSF
SMART SM00356
TIGRFAMs
Post-translational Modifications
Modification
Cross-References
SwissProt Q9UDW3
PhosphoSite PhosphoSite-Q9UDW3
TrEMBL A0A024R1I1
UniProt Splice Variant
Entrez Gene 55954
UniGene
RefSeq NP_061976
HUGO HGNC:28046
OMIM
CCDS CCDS13868
HPRD 14247
IMGT
EMBL AK292671 AL160311 BC009717 BK005198 CH471095 CR456353 CR457393
GenPept AAH09717 BAF85360 CAB77284 CAG30239 CAG33674 DAA05496 EAW59837 EAW59838

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca