Version 5.4
Mus musculus Protein: Ythdc1
Summary
InnateDB Protein IDBP-400669.4
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Ythdc1
Protein Name YTH domain containing 1
Synonyms
Species Mus musculus
Ensembl Protein ENSMUSP00000113000
InnateDB Gene IDBG-175555 (Ythdc1)
Protein Structure
UniProt Annotation
Function
Subcellular Localization
Disease Associations
Tissue Specificity
Comments
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 5 experimentally validated interaction(s) in this database.
They are also associated with 28 interaction(s) predicted by orthology.
Experimentally validated
Total 5 [view]
Protein-Protein 5 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 28 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0003723 RNA binding
Biological Process
GO:0006376 mRNA splice site selection
Cellular Component
GO:0005634 nucleus
Protein Structure and Domains
PDB ID MGI:2443713
InterPro IPR007275 YTH domain
PFAM PF04146
PRINTS
PIRSF
SMART
TIGRFAMs
Post-translational Modifications
Modification
Cross-References
SwissProt E9Q5K9
PhosphoSite PhosphoSite-E9Q5K9
TrEMBL
UniProt Splice Variant
Entrez Gene 231386
UniGene Mm.490441
RefSeq XP_006534929
MGI ID
MGI Symbol Ythdc1
OMIM
CCDS
HPRD
IMGT
EMBL AC102016 AK173312 BC022697 BC048817
GenPept AAH22697 AAH48817 BAD32590

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca