InnateDB: Systems Biology of the Innate Immune Response

Homo sapiens Protein: COL11A1

Summary

InnateDB Protein

IDBP-485573.3

Last Modified

2014-10-13 [Report errors or provide feedback]

Gene Symbol

COL11A1

Protein Name

collagen, type XI, alpha 1

Synonyms

CO11A1; COLL6; STL2;

Species

Homo sapiens

Ensembl Protein

ENSP00000426533

InnateDB Gene

IDBG-100578 (COL11A1)

Protein Structure

UniProt Annotation

Function

Subcellular Localization

Disease Associations

Tissue Specificity

Comments

Interactions

Number of Interactions

This gene and/or its encoded proteins are associated with 5 experimentally validated interaction(s) in this database.

Experimentally validated
Total	5 [view]
Protein-Protein	2 [view]
Protein-DNA	3 [view]
Protein-RNA	0
DNA-DNA	0
RNA-RNA	0
DNA-RNA	0

Gene Ontology

Molecular Function

Accession	GO Term
GO:0005201	extracellular matrix structural constituent
GO:0030674	protein binding, bridging
GO:0046872	metal ion binding
GO:0050840	extracellular matrix binding

Biological Process

GO:0007601	visual perception
GO:0007605	sensory perception of sound
GO:0022617	extracellular matrix disassembly
GO:0030198	extracellular matrix organization
GO:0030199	collagen fibril organization
GO:0030574	collagen catabolic process
GO:0050910	detection of mechanical stimulus involved in sensory perception of sound

Cellular Component

GO:0005576	extracellular region
GO:0005581	collagen trimer
GO:0005592	collagen type XI trimer
GO:0005788	endoplasmic reticulum lumen

Protein Structure and Domains

PDB ID

InterPro

IPR000885 Fibrillar collagen, C-terminal
IPR001791 Laminin G domain
IPR002181 Fibrinogen, alpha/beta/gamma chain, C-terminal globular domain
IPR008160 Collagen triple helix repeat
IPR008985 Concanavalin A-like lectin/glucanases superfamily

PFAM

PF01410
PF00054
PF02210
PF00147
PF01391

PRINTS

PIRSF

SMART

SM00038
SM00210
SM00282
SM00186

TIGRFAMs

Post-translational Modifications

Modification

Cross-References

SwissProt

P12107