InnateDB: Systems Biology of the Innate Immune Response

Mus musculus Protein: Kdm5c

Summary

InnateDB Protein

IDBP-532085.3

Last Modified

2014-10-13 [Report errors or provide feedback]

Gene Symbol

Kdm5c

Protein Name

lysine (K)-specific demethylase 5C

Synonyms

D930009K15Rik; Jarid1c; mKIAA0234; Smcx;

Species

Mus musculus

Ensembl Protein

ENSMUSP00000122750

InnateDB Gene

IDBG-180176 (Kdm5c)

Protein Structure

UniProt Annotation

Function

Subcellular Localization

Disease Associations

Tissue Specificity

Comments

Interactions

Number of Interactions

This gene and/or its encoded proteins are associated with 3 experimentally validated interaction(s) in this database.
They are also associated with 16 interaction(s) predicted by orthology.

Experimentally validated
Total	3 [view]
Protein-Protein	2 [view]
Protein-DNA	1 [view]
Protein-RNA	0
DNA-DNA	0
RNA-RNA	0
DNA-RNA	0

Predicted by orthology
Total	16 [view]

Gene Ontology

Molecular Function

Accession	GO Term
GO:0005515	protein binding
GO:0008270	zinc ion binding
GO:0016706	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors

Biological Process

GO:0055114

oxidation-reduction process

Cellular Component

Protein Structure and Domains

PDB ID

MGI:99781

InterPro

IPR001965 Zinc finger, PHD-type
IPR011011 Zinc finger, FYVE/PHD-type
IPR013637 Lysine-specific demethylase-like domain
IPR019787 Zinc finger, PHD-finger

PFAM

PF08429
PF00628

PRINTS

PIRSF

SMART

SM00249

TIGRFAMs

Post-translational Modifications

Modification

Cross-References

SwissProt

PhosphoSite