InnateDB: Systems Biology of the Innate Immune Response

Mus musculus Protein: Atrx

Summary

InnateDB Protein

IDBP-534543.3

Last Modified

2014-10-13 [Report errors or provide feedback]

Gene Symbol

Atrx

Protein Name

alpha thalassemia/mental retardation syndrome X-linked homolog (human)

Synonyms

4833408C14Rik; AI447451; ATR2; DXHXS6677E; HP1-BP38; Hp1bp2; Hp1bp38; MRXS3; Rad54; RAD54L; XH2; Xnp; ZNF-HX;

Species

Mus musculus

Ensembl Protein

ENSMUSP00000122875

InnateDB Gene

IDBG-166501 (Atrx)

Protein Structure

UniProt Annotation

Function

Subcellular Localization

Disease Associations

Tissue Specificity

Comments

Interactions

Number of Interactions

This gene and/or its encoded proteins are associated with 17 experimentally validated interaction(s) in this database.
They are also associated with 20 interaction(s) predicted by orthology.

Experimentally validated
Total	17 [view]
Protein-Protein	16 [view]
Protein-DNA	1 [view]
Protein-RNA	0
DNA-DNA	0
RNA-RNA	0
DNA-RNA	0

Predicted by orthology
Total	20 [view]

Gene Ontology

Molecular Function

Accession	GO Term
GO:0003682	chromatin binding
GO:0005515	protein binding
GO:0008270	zinc ion binding

Biological Process

GO:0007283	spermatogenesis
GO:0030900	forebrain development
GO:0045944	positive regulation of transcription from RNA polymerase II promoter
GO:0060009	Sertoli cell development
GO:0072520	seminiferous tubule development

Cellular Component

GO:0000228	nuclear chromosome
GO:0000792	heterochromatin
GO:0005634	nucleus

Protein Structure and Domains

PDB ID

MGI:103067

InterPro

IPR011011 Zinc finger, FYVE/PHD-type

PFAM

PRINTS

PIRSF

SMART

TIGRFAMs

Post-translational Modifications

Modification

Cross-References

SwissProt

PhosphoSite

PhosphoSite-

TrEMBL

A6PWK8

UniProt Splice Variant

Entrez Gene

22589

UniGene

Mm.487149

RefSeq

MGI ID

MGI Symbol

Atrx

OMIM

CCDS

HPRD

IMGT

EMBL

AL670660 AL671893

GenPept