Version 5.4
Mus musculus Protein: Ddx39
Summary
InnateDB Protein IDBP-542278.3
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Ddx39
Protein Name DEAD (Asp-Glu-Ala-Asp) box polypeptide 39
Synonyms 2610307C23Rik; BAT1; Ddx39a; DDXL; URH49;
Species Mus musculus
Ensembl Protein ENSMUSP00000116101
InnateDB Gene IDBG-172499 (Ddx39)
Protein Structure
UniProt Annotation
Function
Subcellular Localization
Disease Associations
Tissue Specificity
Comments
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 3 experimentally validated interaction(s) in this database.
They are also associated with 15 interaction(s) predicted by orthology.
Experimentally validated
Total 3 [view]
Protein-Protein 3 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 15 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0003676 nucleic acid binding
GO:0005524 ATP binding
Biological Process
Cellular Component
Protein Structure and Domains
PDB ID MGI:1915528
InterPro IPR011545 DNA/RNA helicase, DEAD/DEAH box type, N-terminal
IPR014001 Helicase, superfamily 1/2, ATP-binding domain
IPR014014 RNA helicase, DEAD-box type, Q motif
IPR027417 P-loop containing nucleoside triphosphate hydrolase
PFAM PF00270
PRINTS
PIRSF
SMART SM00487
TIGRFAMs
Post-translational Modifications
Modification
Cross-References
SwissProt
PhosphoSite PhosphoSite-
TrEMBL D6RHT5
UniProt Splice Variant
Entrez Gene 68278
UniGene Mm.28222
RefSeq XP_006531396
MGI ID
MGI Symbol Ddx39
OMIM
CCDS
HPRD
IMGT
EMBL AC164432
GenPept

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca