Homo sapiens Protein: MED13L
Summary
InnateDB Protein IDBP-59151.5
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol MED13L
Protein Name mediator complex subunit 13-like
Synonyms PROSIT240; THRAP2; TRAP240L;
Species Homo sapiens
Ensembl Protein ENSP00000281928
InnateDB Gene IDBG-59149 (MED13L)
Protein Structure
UniProt Annotation
Function Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. This subunit may specifically regulate transcription of targets of the Wnt signaling pathway and SHH signaling pathway.
Subcellular Localization Nucleus {ECO:0000305}.
Disease Associations Transposition of the great arteries dextro-looped 1 (DTGA1) [MIM:608808]: A congenital heart defect consisting of complete inversion of the great vessels, so that the aorta incorrectly arises from the right ventricle and the pulmonary artery incorrectly arises from the left ventricle. This creates completely separate pulmonary and systemic circulatory systems, an arrangement that is incompatible with life. The presence or absence of associated cardiac anomalies defines the clinical presentation and surgical management of patients with transposition of the great arteries. {ECO:0000269PubMed:14638541}. Note=The disease is caused by mutations affecting the gene represented in this entry.Note=A chromosomal aberration involving MED13L is found in a patient with transposition of the great arteries, dextro- looped and mental retardation. Translocation t(12;17)(q24.1;q21).
Tissue Specificity Highly expressed in brain (cerebellum), heart (aorta), skeletal muscle, kidney, placenta and peripheral blood leukocytes. Highly expressed in fetal brain. {ECO:0000269PubMed:14638541, ECO:0000269PubMed:15145061}.
Comments
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 20 experimentally validated interaction(s) in this database.
They are also associated with 1 interaction(s) predicted by orthology.
Experimentally validated
Total 20 [view]
Protein-Protein 20 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 1 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0001104 RNA polymerase II transcription cofactor activity
Biological Process
GO:0006357 regulation of transcription from RNA polymerase II promoter
GO:0006366 transcription from RNA polymerase II promoter
Cellular Component
GO:0016592 mediator complex
Protein Structure and Domains
PDB ID
InterPro IPR009401 Mediator complex, subunit Med13
IPR021643 Mediator complex, subunit Med13, N-terminal, metazoa/fungi
IPR029034 Cystine-knot cytokine
PFAM PF06333
PF11597
PRINTS
PIRSF
SMART
TIGRFAMs
Post-translational Modifications
Modification
Cross-References
SwissProt Q71F56
PhosphoSite PhosphoSite-Q71F56
TrEMBL Q9H6Z7
UniProt Splice Variant
Entrez Gene 23389
UniGene Hs.733623
RefSeq NP_056150
HUGO HGNC:22962
OMIM 608771
CCDS CCDS9177
HPRD 10579
IMGT
EMBL AB028948 AF515599 AK023837 AK025280 AL133033 AL137644 AY338463 BC130422 CR749332
GenPept AAI30423 AAQ08182 AAR08418 BAA82977 BAB14697 BAB15103 CAB61363 CAB70855 CAH18186