Version 5.4
Homo sapiens Protein: HMGA2
Summary
InnateDB Protein IDBP-601588.2
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol HMGA2
Protein Name high mobility group AT-hook 2
Synonyms BABL; HMGI-C; HMGIC; LIPO; STQTL9;
Species Homo sapiens
Ensembl Protein ENSP00000439317
InnateDB Gene IDBG-45426 (HMGA2)
Protein Structure
UniProt Annotation
Function
Subcellular Localization
Disease Associations
Tissue Specificity
Comments
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 23 experimentally validated interaction(s) in this database.
They are also associated with 4 interaction(s) predicted by orthology.
Experimentally validated
Total 23 [view]
Protein-Protein 22 [view]
Protein-DNA 1 [view]
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 4 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0003677 DNA binding
Biological Process
GO:0006355 regulation of transcription, DNA-templated
Cellular Component
GO:0000785 chromatin
GO:0005634 nucleus
Protein Structure and Domains
PDB ID
InterPro IPR000116 High mobility group, HMG-I/HMG-Y
IPR017956 AT hook, DNA-binding motif
IPR020478 AT hook-like
PFAM PF02178
PRINTS PR00930
PR00929
PIRSF
SMART SM00384
TIGRFAMs
Post-translational Modifications
Modification
Cross-References
SwissProt
PhosphoSite PhosphoSite-
TrEMBL Q8IZX8
UniProt Splice Variant
Entrez Gene 8091
UniGene Hs.505924
RefSeq
HUGO HGNC:5009
OMIM 600698
CCDS
HPRD 02827
IMGT
EMBL AC090673 AC107308 AF326972
GenPept AAN64002

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca