InnateDB: Systems Biology of the Innate Immune Response

Mus musculus Protein: Tnxb

Summary

InnateDB Protein

IDBP-627591.2

Last Modified

2014-10-13 [Report errors or provide feedback]

Gene Symbol

Tnxb

Protein Name

tenascin XB

Synonyms

Tn-mhc; Tnx;

Species

Mus musculus

Ensembl Protein

ENSMUSP00000127487

InnateDB Gene

IDBG-172715 (Tnxb)

Protein Structure

UniProt Annotation

Function

Subcellular Localization

Disease Associations

Tissue Specificity

Comments

Interactions

Number of Interactions

This gene and/or its encoded proteins are associated with 1 experimentally validated interaction(s) in this database.

Experimentally validated
Total	1 [view]
Protein-Protein	0
Protein-DNA	0
Protein-RNA	1 [view]
DNA-DNA	0
RNA-RNA	0
DNA-RNA	0

Gene Ontology

Molecular Function

Accession	GO Term
GO:0005515	protein binding
GO:0005518	collagen binding
GO:0008201	heparin binding

Biological Process

GO:0006629	lipid metabolic process
GO:0006631	fatty acid metabolic process
GO:0006641	triglyceride metabolic process
GO:0006952	defense response
GO:0007160	cell-matrix adhesion
GO:0016337	single organismal cell-cell adhesion
GO:0030198	extracellular matrix organization
GO:0030199	collagen fibril organization
GO:0032963	collagen metabolic process
GO:0043206	extracellular fibril organization
GO:0043506	regulation of JUN kinase activity
GO:0048251	elastic fiber assembly

Cellular Component

GO:0005576	extracellular region
GO:0005578	proteinaceous extracellular matrix
GO:0005583	fibrillar collagen trimer
GO:0005615	extracellular space
GO:0005622	intracellular

Protein Structure and Domains

PDB ID

MGI:1932137

InterPro

IPR000742 Epidermal growth factor-like domain
IPR002181 Fibrinogen, alpha/beta/gamma chain, C-terminal globular domain
IPR003614 Knottin, scorpion toxin-like
IPR003961 Fibronectin, type III
IPR013111 EGF-like domain, extracellular

PFAM

PF00008
PF00147
PF00041
PF01108
PF07974

PRINTS

PIRSF

SMART

SM00181
SM00186
SM00505
SM00060

TIGRFAMs

Post-translational Modifications

Modification

Cross-References

SwissProt

PhosphoSite