InnateDB: Systems Biology of the Innate Immune Response

Bos taurus Protein: SUPT6H

Summary

InnateDB Protein

IDBP-683454.2

Last Modified

2014-10-13 [Report errors or provide feedback]

Gene Symbol

SUPT6H

Protein Name

suppressor of Ty 6 homolog (S. cerevisiae)

Synonyms

Species

Bos taurus

Ensembl Protein

ENSBTAP00000011900

InnateDB Gene

IDBG-631880 (SUPT6H)

Protein Structure

UniProt Annotation

Function

Subcellular Localization

Disease Associations

Tissue Specificity

Comments

Interactions

Number of Interactions

This gene and/or its encoded proteins are associated with 0 experimentally validated interaction(s) in this database.
They are also associated with 17 interaction(s) predicted by orthology.

Predicted by orthology
Total	17 [view]

Gene Ontology

Molecular Function

Accession	GO Term
GO:0003676	nucleic acid binding
GO:0003677	DNA binding
GO:0003723	RNA binding
GO:0005515	protein binding
GO:0016788	hydrolase activity, acting on ester bonds
GO:0042393	histone binding
GO:0044822	poly(A) RNA binding

Biological Process

GO:0006139	nucleobase-containing compound metabolic process
GO:0006357	regulation of transcription from RNA polymerase II promoter
GO:0010793	regulation of mRNA export from nucleus
GO:0032784	regulation of DNA-templated transcription, elongation
GO:0032968	positive regulation of transcription elongation from RNA polymerase II promoter
GO:0045191	regulation of isotype switching
GO:0050684	regulation of mRNA processing
GO:0051147	regulation of muscle cell differentiation
GO:0061086	negative regulation of histone H3-K27 methylation

Cellular Component

Protein Structure and Domains

PDB ID

InterPro

IPR000980 SH2 domain
IPR003029 Ribosomal protein S1, RNA-binding domain
IPR006641 YqgF/RNase H-like domain
IPR012340 Nucleic acid-binding, OB-fold
IPR017072 Transcription elongation factor Spt6
IPR022967 RNA-binding domain, S1

PFAM

PF00017
PF14633
PF00575

PRINTS

PR00401

PIRSF

PIRSF036947

SMART

SM00252
SM00732
SM00316

TIGRFAMs

Post-translational Modifications

Modification

Cross-References