InnateDB: Systems Biology of the Innate Immune Response

Bos taurus Protein: BT.11942

Summary

InnateDB Protein

IDBP-692231.2

Last Modified

2014-10-13 [Report errors or provide feedback]

Gene Symbol

BT.11942

Protein Name

collagen alpha-1(XVIII) chain

Synonyms

Species

Bos taurus

Ensembl Protein

ENSBTAP00000034542

InnateDB Gene

IDBG-640007 (BT.11942)

Protein Structure

UniProt Annotation

Function

Subcellular Localization

Disease Associations

Tissue Specificity

Comments

Interactions

Number of Interactions

This gene and/or its encoded proteins are associated with 0 experimentally validated interaction(s) in this database.
They are also associated with 3 interaction(s) predicted by orthology.

Predicted by orthology
Total	3 [view]

Gene Ontology

Molecular Function

Accession	GO Term
GO:0005198	structural molecule activity
GO:0005515	protein binding
GO:0042802	identical protein binding

Biological Process

GO:0001525	angiogenesis
GO:0001886	endothelial cell morphogenesis
GO:0007155	cell adhesion
GO:0008284	positive regulation of cell proliferation
GO:0030198	extracellular matrix organization
GO:0030335	positive regulation of cell migration
GO:2000353	positive regulation of endothelial cell apoptotic process

Cellular Component

GO:0005581	collagen trimer
GO:0005604	basement membrane
GO:0005615	extracellular space
GO:0031012	extracellular matrix
GO:0070062	extracellular vesicular exosome

Protein Structure and Domains

PDB ID

InterPro

IPR001791 Laminin G domain
IPR008160 Collagen triple helix repeat
IPR008985 Concanavalin A-like lectin/glucanases superfamily
IPR010363 Domain of unknown function DUF959, collagen XVIII, N-terminal
IPR010515 Collagenase NC10/endostatin
IPR016187 C-type lectin fold

PFAM

PF00054
PF02210
PF01391
PF06121
PF06482

PRINTS

PIRSF

SMART

SM00210
SM00282

TIGRFAMs

Post-translational Modifications

Modification

Cross-References

SwissProt

PhosphoSite