Version 5.4
Bos taurus Protein: SNRPB
Summary
InnateDB Protein IDBP-692557.2
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol SNRPB
Protein Name small nuclear ribonucleoprotein polypeptides B and B1
Synonyms
Species Bos taurus
Ensembl Protein ENSBTAP00000001379
InnateDB Gene IDBG-640309 (SNRPB)
Protein Structure
UniProt Annotation
Function
Subcellular Localization
Disease Associations
Tissue Specificity
Comments
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 0 experimentally validated interaction(s) in this database.
They are also associated with 62 interaction(s) predicted by orthology.
Predicted by orthology
Total 62 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0003723 RNA binding
GO:0005515 protein binding
GO:0044822 poly(A) RNA binding
GO:0071208 histone pre-mRNA DCP binding
Biological Process
GO:0000387 spliceosomal snRNP assembly
Cellular Component
GO:0005634 nucleus
GO:0005683 U7 snRNP
GO:0005685 U1 snRNP
GO:0005687 U4 snRNP
GO:0005689 U12-type spliceosomal complex
GO:0005737 cytoplasm
GO:0005829 cytosol
GO:0030529 ribonucleoprotein complex
GO:0034709 methylosome
GO:0034719 SMN-Sm protein complex
GO:0070062 extracellular vesicular exosome
GO:0071013 catalytic step 2 spliceosome
GO:0071204 histone pre-mRNA 3'end processing complex
Protein Structure and Domains
PDB ID
InterPro IPR001163 Ribonucleoprotein LSM domain
IPR006649 Ribonucleoprotein LSM domain, eukaryotic/archaea-type
IPR010920 Like-Sm (LSM) domain
IPR017131 Small ribonucleoprotein associated, SmB/SmN
PFAM PF01423
PRINTS
PIRSF PIRSF037187
SMART SM00651
TIGRFAMs
Post-translational Modifications
Modification
Cross-References
SwissProt
PhosphoSite PhosphoSite-
TrEMBL G1K134
UniProt Splice Variant
Entrez Gene
UniGene Bt.57435
RefSeq
HUGO HGNC:11153
OMIM
CCDS
HPRD
IMGT
EMBL DAAA02036194
GenPept

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca