InnateDB: Systems Biology of the Innate Immune Response

Bos taurus Protein: SFPQ

Summary

InnateDB Protein

IDBP-694043.2

Last Modified

2014-10-13 [Report errors or provide feedback]

Gene Symbol

SFPQ

Protein Name

splicing factor proline/glutamine-rich

Synonyms

Species

Bos taurus

Ensembl Protein

ENSBTAP00000021719

InnateDB Gene

IDBG-641605 (SFPQ)

Protein Structure

UniProt Annotation

Function

Subcellular Localization

Disease Associations

Tissue Specificity

Comments

Interactions

Number of Interactions

This gene and/or its encoded proteins are associated with 0 experimentally validated interaction(s) in this database.
They are also associated with 118 interaction(s) predicted by orthology.

Predicted by orthology
Total	118 [view]

Gene Ontology

Molecular Function

Accession	GO Term
GO:0000166	nucleotide binding
GO:0000976	transcription regulatory region sequence-specific DNA binding
GO:0003676	nucleic acid binding
GO:0005515	protein binding
GO:0044822	poly(A) RNA binding

Biological Process

GO:0000122	negative regulation of transcription from RNA polymerase II promoter
GO:0000380	alternative mRNA splicing, via spliceosome
GO:0042754	negative regulation of circadian rhythm
GO:0045892	negative regulation of transcription, DNA-templated
GO:0070932	histone H3 deacetylation

Cellular Component

GO:0005634	nucleus
GO:0005654	nucleoplasm
GO:0016363	nuclear matrix
GO:0042382	paraspeckles

Protein Structure and Domains

PDB ID

InterPro

IPR000504 RNA recognition motif domain
IPR012975 NOPS

PFAM

PF00076
PF08075

PRINTS

PIRSF

SMART

SM00360

TIGRFAMs

Post-translational Modifications

Modification

Cross-References

SwissProt

PhosphoSite

PhosphoSite-

TrEMBL

E1BQ37

UniProt Splice Variant

Entrez Gene

618226

UniGene

RefSeq

NP_001193220

HUGO

HGNC:10774

OMIM

CCDS

HPRD

IMGT

EMBL

DAAA02009211

GenPept