Version 5.4
Homo sapiens Protein: RBM8A
Summary
InnateDB Protein IDBP-812476.1
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol RBM8A
Protein Name RNA binding motif protein 8A
Synonyms BOV-1A; BOV-1B; BOV-1C; C1DELq21.1; DEL1q21.1; MDS014; RBM8; RBM8B; TAR; Y14; ZNRP; ZRNP1;
Species Homo sapiens
Ensembl Protein ENSP00000463058
InnateDB Gene IDBG-777027 (RBM8A)
Protein Structure
UniProt Annotation
Function
Subcellular Localization
Disease Associations
Tissue Specificity
Comments
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 94 experimentally validated interaction(s) in this database.
Experimentally validated
Total 94 [view]
Protein-Protein 94 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Gene Ontology

Molecular Function
Accession GO Term
GO:0000166 nucleotide binding
GO:0003676 nucleic acid binding
GO:0003723 RNA binding
GO:0003729 mRNA binding
GO:0005515 protein binding
GO:0044822 poly(A) RNA binding
Biological Process
GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0000381 regulation of alternative mRNA splicing, via spliceosome
GO:0000398 mRNA splicing, via spliceosome
GO:0006366 transcription from RNA polymerase II promoter
GO:0006369 termination of RNA polymerase II transcription
GO:0006406 mRNA export from nucleus
GO:0006417 regulation of translation
GO:0008380 RNA splicing
GO:0010467 gene expression
GO:0016070 RNA metabolic process
GO:0016071 mRNA metabolic process
GO:0031124 mRNA 3'-end processing
Cellular Component
GO:0005634 nucleus
GO:0005654 nucleoplasm
GO:0005737 cytoplasm
GO:0005829 cytosol
GO:0016607 nuclear speck
GO:0035145 exon-exon junction complex
GO:0071013 catalytic step 2 spliceosome
Protein Structure and Domains
PDB ID
InterPro IPR000504 RNA recognition motif domain
IPR008111 RNA-binding motif protein 8
IPR014886 RNA-binding motif
PFAM PF00076
PF08777
PRINTS PR01738
PIRSF
SMART SM00360
TIGRFAMs
Post-translational Modifications
Modification
Cross-References
SwissProt
PhosphoSite PhosphoSite-
TrEMBL A0A023T787
UniProt Splice Variant
Entrez Gene 9939
UniGene
RefSeq NP_005096
HUGO HGNC:9905
OMIM 605313
CCDS CCDS72872
HPRD
IMGT
EMBL AF127761 AF161463 AF182415 AF198620 AF231511 AF231512 AF299118 AF403012 AK075009 AL160282 BC017088 CH471244 CR541805 CR541823 KF051020
GenPept AAD21089 AAF29078 AAF37551 AAG14951 AAG16781 AAG16782 AAG27091 AAH17088 AAL26999 AHX83806 BAG52051 CAG46604 CAG46622 EAW71419

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca