InnateDB: Systems Biology of the Innate Immune Response

Homo sapiens Protein: PRDM2

Summary

InnateDB Protein

IDBP-90603.6

Last Modified

2014-10-13 [Report errors or provide feedback]

Gene Symbol

PRDM2

Protein Name

PR domain containing 2, with ZNF domain

Synonyms

HUMHOXY1; KMT8; MTB-ZF; RIZ; RIZ1; RIZ2;

Species

Homo sapiens

Ensembl Protein

ENSP00000365216

InnateDB Gene

IDBG-90601 (PRDM2)

Protein Structure

UniProt Annotation

Function

Subcellular Localization

Disease Associations

Tissue Specificity

Comments

Interactions

Number of Interactions

This gene and/or its encoded proteins are associated with 14 experimentally validated interaction(s) in this database.

Experimentally validated
Total	14 [view]
Protein-Protein	13 [view]
Protein-DNA	1 [view]
Protein-RNA	0
DNA-DNA	0
RNA-RNA	0
DNA-RNA	0

Gene Ontology

Molecular Function

Accession	GO Term
GO:0003677	DNA binding
GO:0003700	sequence-specific DNA binding transcription factor activity
GO:0005515	protein binding
GO:0008270	zinc ion binding
GO:0018024	histone-lysine N-methyltransferase activity

Biological Process

GO:0006351	transcription, DNA-templated
GO:0006355	regulation of transcription, DNA-templated
GO:0034968	histone lysine methylation

Cellular Component

GO:0005634

nucleus

Protein Structure and Domains

PDB ID

InterPro

IPR001214 SET domain

PFAM

PF00856

PRINTS

PIRSF

SMART

SM00317

TIGRFAMs

Post-translational Modifications

Modification

Cross-References

SwissProt

Q13029

PhosphoSite

PhosphoSite-Q13029

TrEMBL

UniProt Splice Variant

Entrez Gene

7799

UniGene

Hs.613210

RefSeq

NP_001129082

HUGO

HGNC:9347

OMIM

601196

CCDS

CCDS44061

HPRD

03120

IMGT

EMBL

AL031277 AL359771 AL583942 BC014468 BX647310 D45132 U17838 U23736

GenPept

AAA87023 AAC50820 BAA08110 CAH70943 CAI19343